Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 627 1e-174
seq15224 269 3e-67
seq8938 197 2e-45
seq15824 170 2e-37
seq10333 156 5e-33
seq12877 154 2e-32
seq12771 152 6e-32
seq15982 150 2e-31
seq5553 145 9e-30
seq13902 125 8e-24
seq14024 123 3e-23
seq45009 109 6e-19
seq16221 100 3e-16
>seq11475
Length=22225
Score = 627 bits (694), Expect = 1e-174
Identities = 751/1015 (74%), Gaps = 4/1015 (0%)
Strand=Plus/Minus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | |||| || || || ||||| |||||||||||
Sbjct 12883 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCTGGT 12824
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||||||| | || | || |||||| |||| || ||||| |||
Sbjct 12823 CTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACGACGTTT 12764
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557
| || ||||| || || || | || ||||| || | ||||| ||| ||||| |
Sbjct 12763 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCATATTTGGAAGGCTGC-AATTTCTT 12705
Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617
|| ||||| || || || |||||| || | | | || ||| | | | || |||||
Sbjct 12704 AACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCTGTGGGG 12645
Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677
|||||| | |||||||| || || ||||| ||| | || || | ||| | |||||
Sbjct 12644 TCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGT 12585
Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737
|||||| || ||||| |||| || |||||||||||| |||| ||||| ||| |||||||
Sbjct 12584 TGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCG 12525
Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796
||| ||| | || ||||| ||||| || || ||||| || || |||||||||||||
Sbjct 12524 ATCT-GTTCAATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTG 12466
Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856
| |||||||| || |||||||| ||||| ||| ||||||||||| |||||||| |
Sbjct 12465 TTTCTGTATTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTG 12406
Query 159857 GGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCA 159916
| |||||||| || ||| ||||| | | || |||| || || || || ||||| || |
Sbjct 12405 GTGTAGCAGCTATTTTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGA 12346
Query 159917 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCC 159976
|||| || ||||||||||||||||||||| || | || | || ||| | || || || |
Sbjct 12345 ACCCTTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTC 12286
Query 159977 ATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGG 160036
|||||||||| ||||| || || || || || ||||| || ||||| ||||| ||
Sbjct 12285 ATGGTGCTACCGTAGAAAATACTTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGG 12226
Query 160037 CGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 160096
| ||| | || ||||||| ||||| |||||||| |||||||| || ||||| || ||||
Sbjct 12225 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGT 12166
Query 160097 CGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 160156
| || || || || ||||| ||||| || || || ||| | ||||| || ||||| ||||
Sbjct 12165 CCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 12106
Query 160157 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTC 160216
| || || | ||| |||||| || |||| | | ||||| || || ||||| |
Sbjct 12105 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCCTTGAACCTAC 12046
Query 160217 GTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCT 160276
|||| || || ||||| || || || | ||||| |||||||||||||||||||| |
Sbjct 12045 GTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAGACTT 11986
Query 160277 TCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATC 160336
|||||||||| || || || || |||||||| |||||||||||||||| || ||||
Sbjct 11985 TCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 11926
Query 160337 AACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 11925 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 11871
>seq15224
Length=172684
Score = 269 bits (298), Expect = 3e-67
Identities = 302/404 (75%), Gaps = 0/404 (0%)
Strand=Plus/Plus
Query 158063 GCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCAA 158122
|||||||| ||||| || || || || | ||| || ||| | ||||||| | ||||||
Sbjct 89319 GCATATTCAGCTCCGGTTGCAGCGGCTACTGCCGTTTTCTTGATCTATCCAATTGGTCAA 89378
Query 158123 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 158182
|| || || |||| ||||||| | || || ||||||||||| |||| |||| |||||
Sbjct 89379 GGAAGCTTTTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTGTA 89438
Query 158183 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 158242
||||| || || |||||||||||||||||||| || || ||| | ||||| ||||| |||
Sbjct 89439 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGTA 89498
Query 158243 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGT 158302
||||| || || || || |||||||||||| | || ||||| | || |
Sbjct 89499 TTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAGG 89558
Query 158303 GAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGACC 158362
||||| || |||| || || || | ||||| | || |||||||| ||||| ||
Sbjct 89559 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACT 89618
Query 158363 TACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 158422
|| || ||||| || || |||| || || ||||| |||||||||||||| ||| |||
Sbjct 89619 TATAATATCGTAGCTGCTCATGTTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTC 89678
Query 158423 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 158466
||||| |||||||| || ||||||||| | ||||| ||||| ||
Sbjct 89679 AACAATTCCCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCGGT 89722
Score = 116 bits (128), Expect = 4e-21
Identities = 122/161 (76%), Gaps = 6/161 (4%)
Strand=Plus/Plus
Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392
||||| | || |||||||| ||||| || || || ||||| || || ||||| || ||
Sbjct 89734 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 89793
Query 158393 GGTCGTTTGATCTTC------CAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTC 158446
||||| ||||||||| ||||| ||| |||||||| || ||||| || ||||||
Sbjct 89794 GGTCGATTGATCTTCCAATATCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTC 89853
Query 158447 TTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 158487
||| | ||||| ||||| || ||||| || ||||| || ||
Sbjct 89854 TTCTTAGCTGCTTGGCCGGTAGTCGGTATTTGGTTTACTGC 89894
Score = 104 bits (114), Expect = 3e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 157805 ATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 157864
||||| || || || ||||| ||| | || || || | || || ||||| || || |||
Sbjct 89156 ATTGATGGGATTCGTGAACCTGTTTCGGGATCTCTACTTTACGGAAACAATATTATTTCT 89215
Query 157865 GGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCA 157924
||||| || |||||| ||| || || || | || || || || || |||||||||
Sbjct 89216 GGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCATTTTTATCCAATATGGGAAGCA 89275
Query 157925 GCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTT 157961
|||||| |||| |||||| | ||||| ||||||||||
Sbjct 89276 GCATCTGTTGATGAGTGGTTATATAATGGTGGTCCTT 89312
Score = 102 bits (112), Expect = 9e-17
Identities = 123/165 (75%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 157721 TGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGC 157779
||||| ||||| ||||||||||||| || | |||||||| ||||| || || | ||
Sbjct 88977 TGGTTTGGTGTTTTGATGATTCCTACATTATTGACTGCAACT-TCTGTATTTATTATAGC 89035
Query 157780 CTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACT 157839
|||| | |||||||| || || | ||||| || || || ||||| ||| | || || ||
Sbjct 89036 CTTCATTGCTGCTCCGCCAGTCAATATTGATGGGATTCGTGAACCTGTTTCGGGATCTCT 89095
Query 157840 CATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTC 157884
| || || ||||| || || |||||||| || |||||| |||
Sbjct 89096 ACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTC 89140
>seq8938
Length=12132
Score = 197 bits (218), Expect = 2e-45
Identities = 236/318 (74%), Gaps = 2/318 (1%)
Strand=Plus/Minus
Query 160076 TCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGC 160135
|||| || ||||| || ||||| || | || || ||||| ||||| || || | |||
Sbjct 2040 TCACCGCTAACCGTTTTTGGTCCCAACTTTTTGGGGTTGCTTTTTCCAATAAAAGTTGGT 1981
Query 160136 TTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTA 160195
| ||||| || ||||| ||||| || || | | | |||||| || |||| |
Sbjct 1980 TACATTTCTTTATGTTATTTGTACCAGTAACCGTTTTATGGATGAGTGCTCTTGGGGTAG 1921
Query 160196 TTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGAT-TA-GAGCAGC 160253
| ||||| || || ||||| ||||| || || ||||| || || || || | |||||
Sbjct 1920 TCGGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATATACGTGCAGC 1861
Query 160254 AGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCG 160313
|||||||||||||||||||| ||||||||||| || || || || |||||||| ||||
Sbjct 1860 CGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCG 1801
Query 160314 TGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACT 160373
||||||||||| || ||||| || ||||||||| |||| ||||||||||| || ||
Sbjct 1800 TGCTTGGATGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCT 1741
Query 160374 ACCTAGAGGTAACGCACT 160391
||| | || ||||| ||
Sbjct 1740 ACCCCGTGGAAACGCTCT 1723
>seq15824
Length=139560
Score = 170 bits (188), Expect = 2e-37
Identities = 190/250 (76%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 159688 GGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGG 159746
|||| |||| || ||| ||||||| |||| ||||| ||| ||||||| |||| ||
Sbjct 61362 GGTGTTTTCGGACTAATAAGTTTTAT--TACGCCAATTCGAACTTGCTCGATCTATTTAA 61305
Query 159747 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATT 159806
| | || ||||| ||||| || || ||||| || || |||||||||||||| |||||
Sbjct 61304 T-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTGTTTCTGTATT 61246
Query 159807 CCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGC 159866
||| || |||||||| | ||| ||| ||||||||||| |||||||| || ||||||||
Sbjct 61245 CCTAATTTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 61186
Query 159867 AATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCA 159926
|| ||| ||||| | | || |||| || || || || ||||| | ||| | || ||
Sbjct 61185 TATTTTTCGATTCATCCTATTTTTTCAAGGGTTTCATAATTGGACGCAGAACTCTTTTCA 61126
Query 159927 TATGATGGGA 159936
||||||||||
Sbjct 61125 TATGATGGGA 61116
>seq10333
Length=16991
Score = 156 bits (172), Expect = 5e-33
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 159939 TGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACAC 159998
||||||| || | || | || ||| | || || || ||||||||||| ||||| || ||
Sbjct 6646 TGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATAC 6705
Query 159999 ATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGA 160058
|| || || ||||| || ||||| ||||| ||| ||| | || ||||||| ||
Sbjct 6706 TTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGA 6765
Query 160059 AGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATT 160118
||| |||||||| |||||||| || ||||| || ||||| || || || || ||||| ||
Sbjct 6766 AGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGTCCCAAATTTTTGGGGTTGCTTT 6825
Query 160119 TTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 160177
||| || || || ||| | ||||| || ||||| ||||| || || | ||| ||||||
Sbjct 6826 TTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACAGGTTTATGGA 6884
>seq12877
Length=40778
Score = 154 bits (170), Expect = 2e-32
Identities = 144/183 (79%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 160209 CAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATT 160268
|| |||| |||| || || ||||| || || || | ||||| ||||||||||||||
Sbjct 742 CACCCTTAGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATT 801
Query 160269 TGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACC 160328
|||||| ||||||||||| || || || || |||||||| |||||||||||||||| |
Sbjct 802 TGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGC 861
Query 160329 TGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGC 160388
| ||||| || ||||||||| |||| ||||||||||| || ||||| | || |||||
Sbjct 862 TCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 921
Query 160389 ACT 160391
||
Sbjct 922 TCT 924
>seq12771
Length=31889
Score = 152 bits (168), Expect = 6e-32
Identities = 190/255 (75%), Gaps = 8/255 (3%)
Strand=Plus/Minus
Query 159688 GGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGG 159746
||| | |||| || |||||||||||| |||| ||||| ||| ||||||| ||| |||
Sbjct 8621 GGTACTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCT-GTTCA 8563
Query 159747 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATT 159806
| || ||||| ||||| || || ||||| || | |||| ||||||||| |||||
Sbjct 8562 ATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCAAATTGTTGTTTTTGTTTCTGTATT 8503
Query 159807 CCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG----GGTAG 159862
||| || |||||||| | ||| ||| ||||||||||| |||||||| || ||||
Sbjct 8502 CCTAATTTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTATGTAG 8443
Query 159863 CAGCAATCTTTAGATTCCTGTTGTTCCTTC-AGGGTTTCCACAACTGGACCCTCAACCCC 159921
|| | || ||| ||| | | | || ||| ||||||| || || ||||| | |||||
Sbjct 8442 CAACTATTTTTCGATCCATCCTCTTTTTTCGAGGGTTT-CATAATTGGACGTTGAACCCT 8384
Query 159922 TTCCATATGATGGGA 159936
|| ||||||||||||
Sbjct 8383 TTTCATATGATGGGA 8369
>seq15982
Length=164312
Score = 150 bits (166), Expect = 2e-31
Identities = 315/464 (68%), Gaps = 13/464 (3%)
Strand=Plus/Plus
Query 159415 TTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGC 159474
||| | ||||| || |||||| | || | ||| |||| || | || | ||| | ||
Sbjct 19966 TTTTTTTTTGTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGG 20023
Query 159475 GGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACACCCAC----GGTCTTGCTAG 159530
|||||| ||| ||| ||||| ||| | || ||||| || || || | || |
Sbjct 20024 GGTTGGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCG 20083
Query 159531 TTCCTACCTTGAAGGTGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTAT 159590
||| || | |||||| ||||| | || ||||| || || || | |||| | | |
Sbjct 20084 TTCATATTTGGAAGGTTGCAATTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTT 20143
Query 159591 GGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTG 159650
| || ||| || | || ||||| ||| | ||||||| || || |||||
Sbjct 20144 AGCACACTCT----TTGTTGTTGTGGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTG 20199
Query 159651 CCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTT 159710
||| | || || | ||| | |||||| |||| || ||||| || | || ||||||||
Sbjct 20200 TCAATTAGG-GGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTT 20258
Query 159711 TATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTG 159769
|||| |||| ||||| ||| ||| || ||| ||| | | |||| | ||| ||||
Sbjct 20259 TATGTTACGCCAATTCGAACATGCGCGATCT-GTTCAATTGTGCTCTTATAGTGCAATTG 20317
Query 159770 CGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGT 159829
| ||||| || || |||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 20318 CATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAAT 20377
Query 159830 CTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTT 159873
|| ||||| ||||| |||||||| || || |||| || |||
Sbjct 20378 CTAGTTGGTTTTTTGCGCCTAGTTTTGGTATAACAGCTATTTTT 20421
Score = 118 bits (130), Expect = 1e-21
Identities = 186/264 (70%), Gaps = 13/264 (5%)
Strand=Plus/Plus
Query 160138 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 160197
||||| || ||||||||||| || | | ||| |||||| || ||| | |
Sbjct 21395 CATTTCTTTATGTTGTTTGTACCAATAACCGGTTTATGGATGAGTGCTCTTGAGTTAGTC 21454
Query 160198 GGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTA-GAGCAGCAGA 160256
||| | || || ||||| ||||| || || ||||| || |||| | | ||||| ||
Sbjct 21455 GGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCA--AGATAACGTGCAGCTGA 21512
Query 160257 AGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTC---- 160312
||||||| |||||||||| |||||||||| || || || | |||||||| |||
Sbjct 21513 AGATCCTAAATTTGAGACTTTCTACACCAGAAATATTCTCTC-AATGAAGGTATTCAGGT 21571
Query 160313 -----GTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGA 160367
||||||||||||| || ||||| || ||||||||| |||| ||||||||| |
Sbjct 21572 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGAA 21631
Query 160368 AGTACTACCTAGAGGTAACGCACT 160391
| ||||| | || ||||| ||
Sbjct 21632 GGCTCTACCCTGTGGAAACGCTCT 21655
>seq5553
Length=10595
Score = 145 bits (160), Expect = 9e-30
Identities = 314/464 (68%), Gaps = 13/464 (3%)
Strand=Plus/Plus
Query 159415 TTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGC 159474
||| | ||| | || |||||| | || | ||| |||| || | || | ||| | ||
Sbjct 5476 TTTTTTTTTTTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGG 5533
Query 159475 GGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACACCCAC----GGTCTTGCTAG 159530
|||||| ||| ||| ||||| ||| | || ||||| || || || | || |
Sbjct 5534 GGTTGGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCG 5593
Query 159531 TTCCTACCTTGAAGGTGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTAT 159590
||| || | |||||| ||||| | || ||||| || || || | |||| | | |
Sbjct 5594 TTCATATTTGGAAGGTTGCAATTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTT 5653
Query 159591 GGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTG 159650
| || ||| || | || ||||| ||| | ||||||| || || |||||
Sbjct 5654 AGCACACTCT----TTGTTGTTGTGGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTG 5709
Query 159651 CCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTT 159710
||| | || || | ||| | |||||| |||| || ||||| || | || ||||||||
Sbjct 5710 TCAATTAGG-GGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTT 5768
Query 159711 TATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTG 159769
|||| |||| ||||| ||| ||| || ||| ||| | | |||| | ||| ||||
Sbjct 5769 TATGTTACGCCAATTCGAACATGCGCGATCT-GTTCAATTGTGCTCTTATAGTGCAATTG 5827
Query 159770 CGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGT 159829
| ||||| || || |||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 5828 CATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAAT 5887
Query 159830 CTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTT 159873
|| ||||| ||||| |||||||| || || |||| || |||
Sbjct 5888 CTAGTTGGTTTTTTGCGCCTAGTTTTGGTATAACAGCTATTTTT 5931
>seq13902
Length=44788
Score = 125 bits (138), Expect = 8e-24
Identities = 237/343 (69%), Gaps = 12/343 (3%)
Strand=Plus/Minus
Query 159456 TGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACAC 159515
||||||| | || | || |||||| |||| | ||||| ||| | || ||||| ||
Sbjct 6424 TGCTTAT-TCGCTGTAGGGGGTTGGTTTACAAGTACGACGTTTGTAACCTCATGGTATAC 6366
Query 159516 CCACGGT-------CTTG-CTAGTTCCTACCTTGAAGGTGCTAATTTTCTCACGGCAGCT 159567
|| || |||| | ||||| || | |||| |||||| | || ||||||
Sbjct 6365 TCATGGGTTGGCCACTTGGCCAGTTCATATTTGAAAGGCTGTAATTTCTTAACCGCAGCT 6306
Query 159568 GTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTA-CTTTGGGGTCCTGAGTC 159626
|| || || |||||| || | | | || ||| || || | || ||| ||||||| |
Sbjct 6305 GTTTCCACTCCTGCTAATAGTTTAGCACACTCTTTTGTTGTTTCTGTGGAGTCCTGAAGC 6246
Query 159627 TCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCA 159686
|||||||| || || ||||| ||| | || || ||| | ||||||| ||| ||
Sbjct 6245 ACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACTTTTGTTGATCTTCA 6186
Query 159687 CGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTG 159745
||||| ||| || |||||||||||| |||| ||||| ||| ||||||| ||| |||
Sbjct 6185 TGGTGCTTTCAGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCT-GTTC 6127
Query 159746 GTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGC 159788
| || ||||| ||||| || || ||||| || || |||||
Sbjct 6126 AATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGC 6084
>seq14024
Length=49420
Score = 123 bits (136), Expect = 3e-23
Identities = 250/366 (68%), Gaps = 9/366 (2%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | |||||| || || ||||| |||| ||| ||
Sbjct 34637 TTTGATATTATGGATGACTGGTTACGTAGAGATCATTTCGTTTTTGTAGGTTAGTCGGGT 34696
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACT-----GGCACGA 159493
|| | || |||| ||||||| | || | || |||||| ||| | || ||||
Sbjct 34697 CTATTGCTCTTTCCTTGTGCTTATTTTGCTGTAGGGGGTTGGTTTAATTTACAGGTACGA 34756
Query 159494 CTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAAT 159552
| ||| | || ||||| || || || | || ||||| || | ||||| ||| |||
Sbjct 34757 CGTTTGTAACTTCATGGTATACTCATGGGATGGCCAGTTCATATTTGGAAGGCTGC-AAT 34815
Query 159553 TTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT 159612
|| | || ||| | || || |||||| || | | | || ||| || || | ||
Sbjct 34816 TTCTTAACCGCAATCGATTCTACTCCTGCTAATAGTTTAGCACACTCT-TTGTTGTTGTT 34874
Query 159613 -TGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTC 159671
||||||||||| | |||||||| || || ||| | ||| | || || ||| |
Sbjct 34875 GTGGGGTCCTGAAGCACAAGGCGATTTTACTCGTTGGCGTCAATTAGGCGGCCAGTGGAC 34934
Query 159672 CTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAAT 159731
||||||||||| || ||||| |||| || |||||| ||||| |||| ||||| || |
Sbjct 34935 TTTTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTCTTATGTTACGCCAATTCAAACT 34994
Query 159732 TGCTCG 159737
||||||
Sbjct 34995 TGCTCG 35000
>seq45009
Length=33691
Score = 109 bits (120), Expect = 6e-19
Identities = 131/176 (74%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 159614 GGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCT 159673
|| ||||||| | |||||||| || || ||||| ||| | || || ||| | |
Sbjct 13923 GGNGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACTT 13864
Query 159674 TTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTG 159733
|||||||||| || ||||| |||| || |||||||||||| |||| ||||| ||| |||
Sbjct 13863 TTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTG 13804
Query 159734 CTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGC 159788
|||| ||| ||| | || ||||| ||||| || || ||||| || || |||||
Sbjct 13803 CTCGATCT-GTTCAATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGC 13749
>seq16221
Length=317861
Score = 100 bits (110), Expect = 3e-16
Identities = 113/149 (76%), Gaps = 7/149 (5%)
Strand=Plus/Plus
Query 159685 CACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGT 159743
|| ||||| |||| || |||||||||||| |||| ||||| ||| ||||||| ||| ||
Sbjct 115390 CATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCT-GT 115448
Query 159744 TGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG-----TC 159798
| | || ||||| ||||| || || ||||| || || ||||||||||||| |
Sbjct 115449 TCAATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTGTTTAATT 115508
Query 159799 AGCGTATTCCTTATCTATCCACTGGGTCA 159827
||||||||| || |||||| | |||||
Sbjct 115509 TCCGTATTCCTAATTTATCCATTAGGTCA 115537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572701043673600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |