Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_027335.1
Length=145518
Score E
Sequences producing significant alignments: (Bits) Value
seq16093 89.7 5e-13
seq4271 89.7 5e-13
>seq16093
Length=196541
Score = 89.7 bits (98), Expect = 5e-13
Identities = 71/83 (86%), Gaps = 2/83 (2%)
Strand=Plus/Plus
Query 102458 AACTAATTATATTAAGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAAC-CGAA 102516
||||||| ||||||||| | |||||||||||||| ||||| | ||| ||||| ||||
Sbjct 126135 AACTAATAATATTAAGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAA 126194
Query 102517 CGGTCGCAGGTTCGAGACCTGCA 102539
||||||||||||||||||||||
Sbjct 126195 -GGTCGCAGGTTCGAGACCTGCA 126216
>seq4271
Length=7765
Score = 89.7 bits (98), Expect = 5e-13
Identities = 71/83 (86%), Gaps = 2/83 (2%)
Strand=Plus/Plus
Query 102458 AACTAATTATATTAAGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAAC-CGAA 102516
||||||| ||||||||| | |||||||||||||| ||||| | ||| ||||| ||||
Sbjct 5330 AACTAATAATATTAAGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAA 5389
Query 102517 CGGTCGCAGGTTCGAGACCTGCA 102539
||||||||||||||||||||||
Sbjct 5390 -GGTCGCAGGTTCGAGACCTGCA 5411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 465267227517440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |