Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq16265 107 9e-19 >seq16265 Length=549659 Score = 107 bits (118), Expect = 9e-19 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || || ||||| || || ||||| || | ||| | |||||| || |||| ||||||| Sbjct 484687 CGAGTGCCGAACTGTCCGTTAGGCATCAAAAGATTGACATTGTTGGAGCCAACAAAATTC 484628 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 |||||||| |||| |||| | | || ||| |||||||| |||||||| | || | | Sbjct 484627 TGAGCCATACCGACGATTGTAGTCTGTATACTTGCTTCACCATGATGATAAGCCGACTTT 484568 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTTA 65240 || || || || ||||| || || |||||| ||| Sbjct 484567 TCCGACACGTAACCACTGAACTGTGCAACTCTTA 484534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235550491483200