Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq938 147 2e-30 seq29890 143 3e-29 >seq938 Length=1173706 Score = 147 bits (162), Expect = 2e-30 Identities = 387/585 (66%), Gaps = 7/585 (1%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||| |||||||| ||||| || | ||||||||||| ||| || ||||| |||| Sbjct 1020734 ACAACAGGCATGCGAAGTCGCAGTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAA 1020793 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || || || ||||| || |||||||| ||||||||||| ||| ||| ||| | Sbjct 1020794 AAGTTAATCCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGG 1020853 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | |||||||| ||||| ||| | ||||| |||| || || ||||| | | || | Sbjct 1020854 AGAAGAATATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGATC 1020913 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 || || ||||| | |||||| ||| || | || | ||| | || || | Sbjct 1020914 CGT--CG-ATCCAACGTAGGGCCCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAA 1020970 Query 17196 TGGC-CTTAAATAATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAG 17253 | || | || ||||| | | | | || | || || || |||| || || Sbjct 1020971 TAGCTCGGAAGAGGCGACTCTTCT--CGGCCGAATCTTTGATGTATGTTTCGAGCAGAAG 1021028 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 |||||||| |||||||| |||||||| || || ||||| ||||||||||| || || Sbjct 1021029 ACTGTACATCTCGGAGTGGATGTTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGC 1021088 Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || | | || ||||| ||| | | |||||||| || |||||||| || Sbjct 1021089 CTCGGAAACCTGGACTTCTTTCATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATC 1021148 Query 17374 GCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAAC 17433 | || || || || |||| | ||| || ||||||| || || || | || || | Sbjct 1021149 GGAGGCAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGC 1021208 Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493 ||||| | || | || | ||| || || |||| |||||||| ||| | Sbjct 1021209 TTCCCAGTGGGCGAGGTCCTGCGACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTC 1021268 Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| || ||||| | |||||| | | ||| | |||||||| Sbjct 1021269 GGCCTTCTTGTACATTTCCCAAATCTGAGGGTACTCAATGGGGAA 1021313 >seq29890 Length=111316 Score = 143 bits (158), Expect = 3e-29 Identities = 384/581 (66%), Gaps = 7/581 (1%) Strand=Plus/Plus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 || ||| ||||| ||||| || | || ||||||||| ||| | ||||| || || || Sbjct 72423 CAAACAGGCGAAGTCGCAGTGCAGCCCTTCGTCTCTGGAGATTAACTCGTTCGAGAAAGT 72482 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 || || ||||| ||||| || || | ||| ||||| | | ||| || ||||| Sbjct 72483 CAGTCCCGGCATTAGCCCTCGCTTTTTGAGCCAGAATATGGAGCAGAAGCTTCCGGAAAA 72542 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||||||||| ||||| | || || || | || ||| || || ||| | | | Sbjct 72543 GAATATACCTTCGACACAAGCGAAGGCCACTATTCGCTCCGCAAACGACTCCGACCCCT- 72601 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 ||| |||| | |||||| ||| || || ||||| || ||||| || || Sbjct 72602 -CGA-TCCAGCGGAGGGCCCACTTGGCCTTCGTCTCGATGCAGGGGATGGTTTCGATCGC 72659 Query 17200 CTTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257 | || | | | |||| | | | | || | || || || |||| | |||||| Sbjct 72660 GTGGAAGAGCAGGT-TCTTCTCCGCGGAA-TCTTTGATGTAAGTTTCGAGCAAGAGGCTG 72717 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 ||||| |||||||| |||||||| ||||| |||||||| ||||| ||| || || ||| Sbjct 72718 TACATCTCGGAGTGGATGTTCTCTATGGCGATCTGAAAGCCGTAGAAGGCCCGAGCCTCC 72777 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | | || || ||| |||||| |||| || || || |||||||||||| Sbjct 72778 GAGACCTGGACCTCCTTCATGAATCGGCCCGCAAGGTTCTCCAATACGATGCCGTCGGAT 72837 Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGC 17437 |||||||| || || | | || || ||||||| || ||||| | |||||| || | Sbjct 72838 GCGGCGAAGAAGGCGAGCACGTGTTTGATGAAATGCTTCTCGTCAGCAGTAAGAGCGTCC 72897 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 |||| | ||| | ||| | ||| || || || | ||||| || || | || Sbjct 72898 CAGTGTCGGAGATCCTGGGACAAATCGACCTCCTCAGCCGTCCAGAAGGAGGCTTCGGCT 72957 Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 || || ||||| | ||| || | | ||| ||||| ||||| Sbjct 72958 TTCTTGTACATCTCCCAGATTTGAGGGTACTGTATCGGGAA 72998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514946537751360