Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq25453 93.3 4e-14 seq26997 87.8 2e-12 seq23032 82.4 7e-11 seq18673 82.4 7e-11 >seq25453 Length=344677 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 29045 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 29104 ||||||| || || |||||| | || ||| || || ||||| ||||| || || || Sbjct 136913 AAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAGAGACTGATCTTCGCAGGGAA 136854 Query 29105 ACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||| || ||| || || | || ||||||||||| ||||||||||||||||| || Sbjct 136853 GCAACTTGAGGATGGCAGGACCCTTGCAGATTACAATATACAGAAGGAATCTACTCTACA 136794 Query 29165 CATGGTGTTACGATTACGAGGAGG 29188 | | ||| |||| || | ||||| Sbjct 136793 CCTTGTGCTACGTTTGAGGGGAGG 136770 >seq26997 Length=104544 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | || ||| || ||||| || || ||||| || ||||| ||||| Sbjct 29833 GACAAGGAAGGTATACCACCAGACCAGCAAAGGCTCATATTTGCCGGTAAACAGTTGGAA 29774 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| || ||| |||| ||||||||||| ||||| ||||| ||||||||| Sbjct 29773 GATGGCAGGACTTTGGCAGATTACAATATCCAGAAAGAATCGACTCTTCAC 29723 >seq23032 Length=1100947 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | || || ||||| || ||||||||||| || |||| | || Sbjct 134210 ATGCAAATATTTGTGAAGACTTTGACCGGAAAAACCATTACGTTGGAGGTGGAAAGCTCA 134269 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || ||| || || || ||| | ||| ||| || Sbjct 134270 GACACAATAGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCCCCAGACCAG 134329 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || || || |||||| | ||| | || || ||||| Sbjct 134330 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTCGCAGACTACAAC 134389 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 |||||||| || || |||||||| Sbjct 134390 ATTCAGAAAGAGTCCACTCTTCA 134412 >seq18673 Length=525508 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||||||| | || ||||| || || || |||||||| || || Sbjct 460835 AAAATTCAGGATAAAGAAGGTATTCCTCCTGATCAGCAGAGGCTGATCTTTGCCGGGAAG 460776 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 || ||||| ||| |||| | || ||||||||||| ||||| || |||||||| ||| Sbjct 460775 CAGCTGGAGGATGGACGAACTCTAGCGGATTACAATATCCAGAAAGAGTCTACTCTCCAC 460716 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | || |||||| || || || |||||||| ||||| || || || Sbjct 497748 GACAAAGAAGGCATCCCACCAGATCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTCGAG 497689 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| ||||||||||| || ||||| || ||||||| Sbjct 497688 GATGGGAGGACTCTAGCTGATTACAACATTCAGAAGGAGTCAACTCTCCATCTGGTGTTG 497629 Query 29175 CGATTACGAGGAGGG 29189 || | |||| ||| Sbjct 497628 AGACTCAGAGGCGGG 497614 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | || |||||| || || || |||||||| ||||| || || || Sbjct 498204 GACAAAGAAGGCATCCCACCAGATCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTCGAG 498145 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| ||||||||||| || ||||| || ||||||| Sbjct 498144 GATGGGAGGACTCTAGCTGATTACAACATTCAGAAGGAGTCAACTCTCCATCTGGTGTTG 498085 Query 29175 CGATTACGAGGAGGG 29189 || | |||| ||| Sbjct 498084 AGACTCAGAGGCGGG 498070 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | || |||||| || || || |||||||| ||||| || || || Sbjct 498660 GACAAAGAAGGCATCCCACCAGATCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTCGAG 498601 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| ||||||||||| || ||||| || ||||||| Sbjct 498600 GATGGGAGGACTCTAGCTGATTACAACATTCAGAAGGAGTCAACTCTCCATCTGGTGTTG 498541 Query 29175 CGATTACGAGGAGGG 29189 || | |||| ||| Sbjct 498540 AGACTCAGAGGCGGG 498526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426238715955560