Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq33810 123 3e-23 >seq33810 Length=274286 Score = 123 bits (136), Expect = 3e-23 Identities = 228/333 (68%), Gaps = 25/333 (8%) Strand=Plus/Minus Query 145642 AGCCTGGGAAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTT 145700 |||| || ||||| || || ||| | ||||||||| || | | ||||| ||||| Sbjct 221850 AGCCGCGGCAAGGGGCGCGG-CTCGCGGGTCAGCTGCAGTCGCGCCTGTTCCACATGGTT 221792 Query 145701 GAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC-CCCGGGCTCGAGGCCCGTGA 145759 | ||| | |||||||| ||||| ||| | |||||| ||| || | || || | Sbjct 221791 GTTGTACAGATGCGCGTCGCCCAGCGTGTGCACGAAGTCGCCCACGCCC-AGCCCGCACA 221733 Query 145760 GGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCC 145819 || || ||||||| ||| ||||| | |||||||| |||||||| ||||| || || Sbjct 221732 CCTGCGCCACCATGTGGGTGAGCAGCGCATAGCTGGCGATGTTGAACGGCACGCCGAGGA 221673 Query 145820 CCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC-TCCCCGCC------------- 145865 ||||| || ||||||||||||||||||||| ||| | |||||| Sbjct 221672 AGATGTCGCCGGAGCGCTGGTACAGCTGGCAGCTCAGCTTGCCCGCCTGTCCTGAGCCCG 221613 Query 145866 -------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCA 145918 ||||||||||||||| |||| |||||||||| ||| ||||| |||| Sbjct 221612 TCGAAGGGGCCACGTAGAACTGGAACAGCGTGTGGCAGGGCATCAGCGCCATCTTCGGCA 221553 Query 145919 GGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCC 145951 | || || |||||| ||| ||| || |||| Sbjct 221552 GCTCGCCCACGTTCCACGCGCTGACGATCAGCC 221520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587113493318080