Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq26997 87.8 1e-12 seq191313 86.0 5e-12 seq25453 84.2 2e-11 >seq26997 Length=104544 Score = 87.8 bits (96), Expect = 1e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||| || ||||| || || ||||| || ||||| |||||| Sbjct 29833 GACAAGGAAGGTATACCACCAGACCAGCAAAGGCTCATATTTGCCGGTAAACAGTTGGAA 29774 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 ||| || ||| |||| ||||||||||| || || ||||| ||||||||| Sbjct 29773 GATGGCAGGACTTTGGCAGATTACAATATCCAGAAAGAATCGACTCTTCAC 29723 >seq191313 Length=592 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 ||||| ||||||| ||||| |||||| | ||| |||||| ||| | | || |||| Sbjct 262 TCAAGGCAAAAATTCAAGATAAGGAAGGTATTCCCCCAGATCAGCAACGTTTAATTTTTG 203 Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230 | ||||| || | || ||| || ||| | || ||||| || ||||||||||| || | Sbjct 202 CTGGCAAGCAGCTCGAGGATGGCAGGACTCTAGCTGATTATAACATTCAAAAGGAGTCGA 143 Query 25231 CTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 |||| || ||||||| || | |||| ||| Sbjct 142 CTCTCCATCTGGTGTTGAGACTCAGAGGCGGG 111 >seq25453 Length=344677 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 25118 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 25177 ||||||| || || |||||| | || ||| || || ||||| ||||| || || || Sbjct 136913 AAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAGAGACTGATCTTCGCAGGGAA 136854 Query 25178 ACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | || ||| || || | || ||||||||||| || |||||||||||||| || Sbjct 136853 GCAACTTGAGGATGGCAGGACCCTTGCAGATTACAATATACAGAAGGAATCTACTCTACA 136794 Query 25238 CATGGTGTTACGATTACGAGGAGG 25261 | | ||| |||| || | ||||| Sbjct 136793 CCTTGTGCTACGTTTGAGGGGAGG 136770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408785394061328