Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq33767 82.4 3e-11 seq33802 80.6 1e-10 >seq33767 Length=185007 Score = 82.4 bits (90), Expect = 3e-11 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 53380 CGGGGCTTTTTGTTTCGACGCAGGGTGGAGAAGTGGTCATCTCGCCGGGCCCATAACCCG 53439 ||||| |||| ||||| ||||| | || ||||| || |||| |||| ||||||||| Sbjct 130107 CGGGGTTTTTCGTTTCA--GCAGGTTAGATCAGTGG-CAGATCGCTGGGCTCATAACCCG 130163 Query 53440 GAGATCGCTGGTTCGAATCCAGCCCTTGCTACCA 53473 ||| |||||||||||| |||||| | |||||||| Sbjct 130164 GAGGTCGCTGGTTCGAGTCCAGCACCTGCTACCA 130197 >seq33802 Length=298597 Score = 80.6 bits (88), Expect = 1e-10 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 48985 CGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAAGAC 49044 ||| | || ||||||||| || | |||||| |||||||| |||||||||||||| ||| Sbjct 56408 CGCGCCGACAAGCGCCCGATGATGTCCGACCTGCGCGAGTCGGGCGCCATCGAGCAGGAC 56349 Query 49045 GCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 || ||| | | |||||| | |||||||| || Sbjct 56348 GCCGACGTGATCATGTTCATCTACCGCGACGA 56317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179580748312512