Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq938 143 4e-29 >seq938 Length=1173706 Score = 143 bits (158), Expect = 4e-29 Identities = 396/588 (67%), Gaps = 28/588 (5%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| ||||| ||| | | | ||||||||||||||||| ||||| | || ||||||| Sbjct 1021315 TGTTCCCCATTGAGTACCCTCAGATTTGGGAAATGTACAAGAAGGCCGAAGCTTCCTTTT 1021256 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| ||||| ||| |||| ||||||| | | ||||| | | | |||| Sbjct 1021255 GGACAGCCGAGGAGGTAGATTTGTCGCAGGACCTCGCCCACTGGGAAGCCC---TCACTG 1021199 Query 125116 AAACTGAGCGAGAGTTTATATCGCACA--TTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 |||| || ||| ||| ||| || ||||||||||||| | ||||||||| || Sbjct 1021198 CCGATGAG-AAGCATTT-CATCAAACATGTTCTGGCCTTCTTTGCTGCCTCCGATGGCAT 1021141 Query 125174 CGTCAACGACAATCT-GTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG 125231 ||| || ||||| | || || | ||| ||| ||| | |||| |||| | || Sbjct 1021140 CGTTTTGGAGAATCTAGCTGGCA-GGTTCATGAAAGAAGTCCAGGTTTCC-GAGGCG-CG 1021084 Query 125232 TGC-TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 || |||||||||||||| || || |||||| | ||||| || |||||| | || Sbjct 1021083 CGCGTTTTACGGATTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACAGTCTTCT 1021024 Query 125291 GATTGACATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACA 125349 | | || | ||||| ||| || || || | | ||||| || || |||| Sbjct 1021023 GCTCGAAACATACATCAAAGATTCG-GCCGAGAAGAGTCGCCTCTTCCGAGCTATTGACA 1020965 Query 125350 CGGTGCCGTCTATACGT----AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 | || || || ||| || ||||| | |||| | || |||||||| | | Sbjct 1020964 CAGTCCC----ATGCGTGGAGAAGAAGGCCAAGTGGGCCCTACGTTGGATCGACGGATCC 1020909 Query 125406 AAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCG 125465 | ||| | ||||| | || | || || || ||| ||||| || ||||| || Sbjct 1020908 GAATCT---TTTGCCGAGCGGCTACTCGCCTTTGCTTGCGTTGAGGGGATATTCTTCTCC 1020852 Query 125466 GGTAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCA 125524 || || || ||| ||||| |||||| | ||||| ||||| |||||||| ||| | || Sbjct 1020851 GGGAGCTTCTGC-GCCATATTTTGGTTGAAGAAACGCGGCCTCATGCCAGGATTAACTTT 1020793 Query 125525 CAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||||| | || || |||||||||| || ||||| ||||| || Sbjct 1020792 TTCCAACGAGCTAATCTCGAGAGACGAGGGTCTGCACTGCGACTTCGC 1020745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 737337674803520