Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq33774 356 1e-93 >seq33774 Length=113159 Score = 356 bits (394), Expect = 1e-93 Identities = 591/847 (70%), Gaps = 15/847 (2%) Strand=Plus/Plus Query 66690 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66749 ||||||| || | | |||||| ||| |||||| | || || ||| | ||||| | Sbjct 108113 CCACCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGCGGCCTGCCGCGCGGCCGCG 108172 Query 66750 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66809 || | || ||||||||||| ||||| || || ||| | || ||| || || | | | | Sbjct 108173 TGATCGAGATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTGATCG 108232 Query 66810 CCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 66868 |||| ||| |||||| ||| |||| ||||| | | ||||||| |||||| | || || Sbjct 108233 CCAACTGC-CAGAAGAACGGCGGCACTGCCGCGTTCGTCGACGCCGAGCACGCGCTCGAT 108291 Query 66869 CCCGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 66925 ||| || ||||||| || || ||| || | ||| |||| |||| ||||| Sbjct 108292 CCCACCTATGCCGCCAAG---CTGGGCGTGAACGTGGACGACCTGCTGGTCTCCCAGCCC 108348 Query 66926 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 66985 ||||| ||||| ||||| ||||| |||| ||| | || || || |||| | || Sbjct 108349 GACACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGCTCCGGCGCGGTGGAT 108408 Query 66986 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 67045 | || || || ||||| || || || || ||| ||||| |||||||||| || Sbjct 108409 GTGGTGGTGGTCGACTCGGTCGCCGCATTGACCCCGAAGGCCGAAATCGAAGGCGAGATG 108468 Query 67046 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACT 67105 || || ||||| ||||||||||| ||||| ||| ||||| ||||||||||||| Sbjct 108469 GGCGATTCCCACGTGGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACC 108528 Query 67106 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 67165 | || |||| | | ||| ||| | ||| |||||||| | ||| ||||||| Sbjct 108529 GCCAACATCAAAAAGTCGAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATC 108588 Query 67166 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTAC 67225 ||| || | | |||| ||||||||||| ||||| || || ||| ||||||| Sbjct 108589 GGCGTGATGTTCGGCAGCCCC---GAGACCACCACTGGCGGCAATGCGCTGAAGTTCTAC 108645 Query 67226 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 67285 ||||| || |||||||| |||| ||||||| | | |||| | |||||||||| || Sbjct 108646 GCCTCGGTGCGCATGGACATCCGCCGCATCGGTGCGGTGAAGAAGGGCGATGAGGTGATC 108705 Query 67286 GGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 67345 ||| ||||| || || || || ||||||||| |||| |||||| ||| | ||| Sbjct 108706 GGCTCGGAAACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCTCCGCCGTTTCGCCAGGCC 108765 Query 67346 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 67405 |||||| || | ||||| |||||| |||||| || | ||| || |||| |||| | Sbjct 108766 GAGTTCGAGATCCTCTACGGCGAGGGCTCCTCGCGCGAAGGCGAGATCATCGAACTGGGC 108825 Query 67406 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACG-- 67463 ||| ||||| |||| | | ||||| |||||||||| || ||| || | || || Sbjct 108826 GTGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGGGC--GACCGTA 108883 Query 67464 TCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCGACT 67523 ||| ||||||||| || | ||||| ||||||| |||||||| |||| || || Sbjct 108884 TCGGCCAGGGCAAGGAAAACGTGCGCCAGTTCCTCAAGGACAACCCGGCCATCGCCAACG 108943 Query 67524 CCATCGA 67530 ||||| Sbjct 108944 AGATCGA 108950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241665299251424