Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq18673 84.2 2e-11 >seq18673 Length=525508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 |||||||||| ||| || || || || ||||| ||||| ||||| | | ||| | | Sbjct 460161 CTCAACACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAATCAGCTAGAGTCCTGCCA 460220 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || || | || ||||| ||| | || |||||||| ||||| || | |||||||||| Sbjct 460221 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTG 460280 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||| || ||| || | ||| | |||| | ||| |||| || || Sbjct 460281 TCTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATC 460340 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || || || || || ||||| |||||| Sbjct 460341 GTTTTCCCAGTTAAAGTCTTCACGAAAATCTGCATT 460376 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 |||||||||| ||| || || || || || || ||||||||||| | | ||| | | Sbjct 497627 CTCAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCTAGAGTCCTCCCA 497686 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || || | || ||||| ||| | || |||||||| ||||| || | |||||||||| Sbjct 497687 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTG 497746 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||| || ||| || | ||| | |||| | ||| |||| || || Sbjct 497747 TCTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATC 497806 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || || || || || ||||| |||||| Sbjct 497807 GTTTTCCCAGTTAAAGTCTTCACGAAAATCTGCATT 497842 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 |||||||||| ||| || || || || || || ||||||||||| | | ||| | | Sbjct 498083 CTCAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCTAGAGTCCTCCCA 498142 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || || | || ||||| ||| | || |||||||| ||||| || | |||||||||| Sbjct 498143 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTG 498202 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||| || ||| || | ||| | |||| | ||| |||| || || Sbjct 498203 TCTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATC 498262 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || || || || || ||||| |||||| Sbjct 498263 GTTTTCCCAGTTAAAGTCTTCACGAAAATCTGCATT 498298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 |||||||||| ||| || || || || || || ||||||||||| | | ||| | | Sbjct 498539 CTCAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCTAGAGTCCTCCCA 498598 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || || | || ||||| ||| | || |||||||| ||||| || | |||||||||| Sbjct 498599 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTG 498658 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||| || ||| || | ||| | |||| | ||| |||| || || Sbjct 498659 TCTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATC 498718 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || || || || || ||||| |||||| Sbjct 498719 GTTTTCCCAGTTAAAGTCTTCACGAAAATCTGCATT 498754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417532753164312