Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq33768 89.7 2e-13 >seq33768 Length=156001 Score = 89.7 bits (98), Expect = 2e-13 Identities = 170/245 (69%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 10140 ATGGCAAGCG---TAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTC 10196 |||||| ||| | |||||||| || | || || ||| |||| |||||||| ||| | Sbjct 53117 ATGGCACGCGGCATCAACAAGGTCATCATCGTCGGCAACCTAGGCGCCGATCCGGAAACC 53176 Query 10197 CGTTAC-CTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATA 10255 || ||| | | | |||||| ||| | | | | | || |||| || | || | | Sbjct 53177 CGCTACACCGGC-AGCGGCACCGCCATCACCAGCCTGCGCATCGCCACTTCGGAACAGTG 53235 Query 10256 CAAGGACAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTT 10315 | |||||| ||||||||| | ||||| || |||||||||||||| | | || Sbjct 53236 GACCGACAAGCAGAGCGGCGAGCGCCAGGAGCGCACCGAATGGCACCGCGTGAAGCTGTT 53295 Query 10316 CGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGC--GCATCTGTCTACATC 10373 ||| |||||| ||||||| || |||| ||||| || ||| ||| ||||||||| Sbjct 53296 CGGCAAGCTGGCCGAGATCGCCGGCGAGTACCTGAAGAAAGGCCGGCA--GGTCTACATC 53353 Query 10374 GAGGG 10378 ||||| Sbjct 53354 GAGGG 53358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203297286935496