Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq33802 167 1e-36 >seq33802 Length=298597 Score = 167 bits (184), Expect = 1e-36 Identities = 488/742 (66%), Gaps = 15/742 (2%) Strand=Plus/Minus Query 71898 GGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCCCGCCCATCTATGGGGAAGACCACG 71957 || || ||||| ||||| || ||||| || ||||| ||||| || ||||| |||||| || Sbjct 56921 GGCCTGCAGCCCTCCGACCTGATCATCGTGGCCGCGCGCCCCTCGATGGGCAAGACCGCG 56862 Query 71958 TTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGTAACGATAAGCCCGTATTGGTTTTT 72017 || ||| ||||| ||| ||| | ||||| | || | ||| | ||| ||| || Sbjct 56861 TTCGCGCTGAATATCGCCGAGAGCGCCGCGCTGCGCGCGAAGAAGGCGGTAGCGGTGTTC 56802 Query 72018 AGCCTTGAGATGCCGAGCCAC-CAGCTGATGATGCGCTCACTGG-CTTCTC--TTGCACG 72073 | || ||| | ||| | |||||| | | ||| ||| || ||| | | || Sbjct 56801 TCGATGGAAATGTCC-GCCTCGCAGCTGGCGTTCCGC---CTGATCTCCTCGGTGGGCCG 56746 Query 72074 CGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGACGAGGATTGGGCGCGGGTTTC 72133 | | | ||| | | || | || | || ||| ||||| ||| |||| || || Sbjct 56745 CATCCACCAGCAGCACCTGCGCAACGGCGACCTGGCCGAGGAGGACTGGCCGCGCGTCTC 56686 Query 72134 TGGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTTTTATTGATGACTCAAGCGCCCT 72193 ||| || | ||||| | ||| ||| ||| || || || || ||| | | ||| Sbjct 56685 CAACGCCATCGCGATTCTTTCGGA--AGC-GAAGATCTTCATCGACGACACCCCGGGCCT 56629 Query 72194 GACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTTATAAAGAAAATGGTGGTTTGAG 72253 | ||||| ||| | ||||| ||||| || || | | || | || || || | Sbjct 56628 GTCGCCGGTGGAGATGCGTTCGCGCGCACGCCGGCTGCACCGCGAGCACGGCGGCCTGGG 56569 Query 72254 CATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCGAAC 72313 | |||| |||||||||||||||| || |||| || |||| | | || ||||| | Sbjct 56568 CCTGATCGTGATCGACTACCTGCAGCTGATGCAGGTGCCCGGGAACAAGGAGAACCGCGC 56509 Query 72314 GCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACC 72373 || ||| | || || || || |||||||||| | | || |||||| | | || || Sbjct 56508 CACCGAGATTTCAGAAATCTCGCGTTCACTGAAGGGGCTCGCCAAGGAACTGAACGTGCC 56449 Query 72374 GGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGT 72433 ||| | || | || || | || || ||||| |||||||| || ||||| || ||| | Sbjct 56448 CGTGATCGCCCTCTCGCAGTTGAACCGCTCGCTGGAACAGCGCGCCGACAAGCGCCCGAT 56389 Query 72434 AAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCT 72493 | || || | || || || || || || ||||||||||| ||| |||| ||||| | Sbjct 56388 GATGTCCGACCTGCGCGAGTCGGGCGCCATCGAGCAGGACGCCGACGTGATCATGTTCAT 56329 Query 72494 GTATCGCGACGAAGTTTATCACCCGGA--TAGCGAAATGAAGGGCATTGCCGAGGTAATT 72551 || |||||||| || || ||| ||| | |||||| | |||||| | || Sbjct 56328 CTACCGCGACGAGTACTACAACAAGGAATCGGCGGA--CAAGGGCCTGGCCGAGATCATC 56271 Query 72552 ATCGGAAAGCAACGAAATGGCCCAATTGGCACGGTGAGATTGGCTTTTAACGGCCAATAC 72611 ||||| ||||| || || ||||| | | ||| || | || | || |||||| ||| Sbjct 56270 ATCGGCAAGCAGCGCAACGGCCCCACCGACACCGTCAAGCTGACCTTCCTCGGCCACTAC 56211 Query 72612 TCACGGTTTGATAACTATGCCG 72633 | ||| || ||||| |||| Sbjct 56210 ACCAAGTTCGAGAACTACGCCG 56189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 301750453570392