Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_005882.1 Length=36748 Score E Sequences producing significant alignments: (Bits) Value seq33802 93.3 1e-14 >seq33802 Length=298597 Score = 93.3 bits (102), Expect = 1e-14 Identities = 181/265 (68%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 1601 GGCGTCCTTCAGCCCCTTGCCGGCCTTGAACTTCGGGGCTTTCGACGCTGGAATCTTGAT 1660 ||||||||| ||| |||||| |||||||| || | ||||| || |||||||| Sbjct 14304 GGCGTCCTTGAGCGTCTTGCCAGCCTTGAAGGCGGGAACCTTCGAAGCCTTGATCTTGAT 14363 Query 1661 TTCTTCGCCGGTGGCGGGATTCCGTCCGGTACGGGCGGCCCGCGCGCCCACGCTGAATAC 1720 ||| |||| ||||| || |||||||||||||| ||| || |||| |||| Sbjct 14364 CGTCTCGTTGGTGCGCGGATTGCGACCGGTACGGGCGGCGCGCTTGCGCACGGTGAAGGT 14423 Query 1721 GCCGAATCCCGTCAGCGTCACCGTGTCGCCCTTGCGCAGCGACTTCGTGATGCCTTCG-A 1779 ||||| || || || ||| || ||||| |||||||||| | | ||||| | Sbjct 14424 ACCGAAACCGACCACCGACACATCCTCACCCTTCTTCAGCGACTTCTGCACGACTTCGAA 14483 Query 1780 GAACGGCTTCCAGCGCAAAGCCGGAGTCGGTTTTCGTCATGCCCGTTTCTGCCGCCACGT 1839 |||| ||||| ||||| ||||| |||| || |||| | | | | || | | Sbjct 14484 GAAC-GCTTCGAGCGCGCGGCCGGCATCGGCCTTGGTCAGTTCGGCCTTGTCGGCGATGG 14542 Query 1840 GATTGATCAGGTCCGATTTGTTCAT 1864 ||||||||| || | ||| ||||| Sbjct 14543 CATTGATCAGATCGGTTTTATTCAT 14567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116911563995040