Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8942 125 4e-24 seq14116 114 7e-21 seq5691 107 1e-18 seq16129 104 1e-17 seq26155 102 4e-17 seq21174 102 4e-17 >seq8942 Length=171528 Score = 125 bits (138), Expect = 4e-24 Identities = 79/86 (92%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 133042 AAAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 133101 Query 11512 CAACTGAGCTAATGGGCCGTCGACGA 11537 |||||||||||||||||||||||||| Sbjct 133102 CAACTGAGCTAATGGGCCGTCGACGA 133127 >seq14116 Length=117668 Score = 114 bits (126), Expect = 7e-21 Identities = 82/94 (87%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11438 ATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 |||||| | | |||||| ||||||||| | | |||||||| |||||||||||||||| Sbjct 96993 ATTAATGATATATCAAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 96934 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 96933 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 96900 >seq5691 Length=670933 Score = 107 bits (118), Expect = 1e-18 Identities = 78/91 (86%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 11444 AAAAAATCAAAT-----TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||||||| ||||||||| | | |||||||| ||||||||||||||||||| Sbjct 383469 AAAAAATCAAAAATTAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 383528 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||| |||||||||||||||||||| Sbjct 383529 ACGATGCTCTAACCAACTGAGCTAATGGGCC 383559 >seq16129 Length=126411 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 67188 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 67247 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 67248 TGAGCTAATAGGCC 67261 >seq26155 Length=577472 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||| |||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 433181 AAAGTGGCGCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 433122 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 433121 CAACTGAGCTAATAGGCC 433104 >seq21174 Length=346514 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 34647 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 34706 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 34707 CTGAGCTAATAGGCC 34721 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260210846909152