Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq11769 123 2e-23 >seq11769 Length=300893 Score = 123 bits (136), Expect = 2e-23 Identities = 172/238 (72%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 94174 GTGGGAGCCGGGGACCCCGCGCCGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCG 94233 ||| ||| ||| | |||||| |||||| ||| || ||| ||||||||||| ||||| Sbjct 77597 GTGCGAGGCGGCCAGTCCGCGCTCCACGGTGAGCACCGCGTTGAGCAGCAGCACGCCGCG 77656 Query 94234 GCGCGCCCAGGCCTCCAGGCAGCCGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGC-CC 94292 | ||||||| | |||||||||||| ||||| ||| ||| | | ||||| | Sbjct 77657 GTCGGCCCAGGGCGTGAGGCAGCCGTGGTCGGGC---GGC-GCGATGCCGAGGTCGCGCT 77712 Query 94293 GGACCGCCGCGAAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGA 94352 ||| | || |||||| || |||| || || | |||||| ||| | || || || Sbjct 77713 GGATCTCCTTGAAGATATTCACCAGCGAGGGCGGCACCGGCACGCCGGGGCGCACCGAGA 77772 Query 94353 AGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCAC 94410 | ||| ||||| ||||||||||| |||||||| || |||||||| | ||| ||||| Sbjct 77773 AACACAGACCGTGCGCCTGGCCCGGTCCGTGGTAGGGATCCTGGCCCAGGATCACCAC 77830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 456642413056320