Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq33816 206 8e-49 >seq33816 Length=25254 Score = 206 bits (228), Expect = 8e-49 Identities = 265/361 (73%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 35445 AGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCCACCG 35504 || ||||| | ||||||||||| | |||||| | ||| |||| | ||||||| Sbjct 11462 AGCTGAAGATCCTCGACCCGCGCCTGGGCGATGCGATTCCGCTGCCCGAGCCGGCCACCG 11403 Query 35505 AAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGATGACGTTGCAGCCGG 35564 | ||| || |||||||||||||| ||||| ||||| |||||||| || || || | Sbjct 11402 CCGGCAGCGCCGGCATGGACCTGCGCGCCGCGCTGGACGCGCCGATCACCCTGGCACCCG 11343 Query 35565 GCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTG-TGC 35623 |||| |||||| | |||||||||||||| ||||| | | ||||||| |||| ||| Sbjct 11342 GCGACAGCGCGCTGGTGCCCAGCGGCATCGCCATCCACATCGGCGACCCGG-GCTGGTGC 11284 Query 35624 GCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--G 35681 ||| ||||| | ||||| |||||||| ||||| || ||| | || | |||||| | Sbjct 11283 GCGCTGATCGTTCCGCGTTCGGGGCTGGGCCACAAGCAGGGCCTGGTGATGGGCAACCTG 11224 Query 35682 GTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCG 35741 || |||| | ||||| || || |||||||| || || |||| | |||||| |||| Sbjct 11223 GT--CGGCGTGATCGACGCCGACTACCAGGGACCGCTGATGATTTCCTGCTGGAACCGCG 11166 Query 35742 GCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGG 35801 |||||||| | ||||||||| |||||| || ||||| || ||| || | |||||| Sbjct 11165 GCCGCGAGCCGGTCACCATCGGCGTGGGCGATCGCATTGCCCAACTGCTGCTGGTGCCGG 11106 Query 35802 T 35802 | Sbjct 11105 T 11105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148424501225520