Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq33774 360 9e-95 >seq33774 Length=113159 Score = 360 bits (398), Expect = 9e-95 Identities = 592/847 (70%), Gaps = 15/847 (2%) Strand=Plus/Plus Query 65403 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65462 ||||||| || | | |||||| ||| |||||| | || || ||| | ||||| | Sbjct 108113 CCACCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGCGGCCTGCCGCGCGGCCGCG 108172 Query 65463 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGG 65522 || | || ||||||||||| ||||| || || ||| | || || || || | | | | Sbjct 108173 TGATCGAGATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTGATCG 108232 Query 65523 CCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 65581 |||| ||| |||||| ||| |||| ||||| | | ||||||| |||||| | || || Sbjct 108233 CCAACTGC-CAGAAGAACGGCGGCACTGCCGCGTTCGTCGACGCCGAGCACGCGCTCGAT 108291 Query 65582 CCTGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 65638 || || ||||||| || || ||| || | ||| |||| |||| ||||| Sbjct 108292 CCCACCTATGCCGCCAAG---CTGGGCGTGAACGTGGACGACCTGCTGGTCTCCCAGCCC 108348 Query 65639 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 65698 ||||| ||||| ||||| ||||| |||| ||| | || || || |||| | || Sbjct 108349 GACACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGCTCCGGCGCGGTGGAT 108408 Query 65699 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 65758 | || || || ||||| || || || || ||| ||||| |||||||||| || Sbjct 108409 GTGGTGGTGGTCGACTCGGTCGCCGCATTGACCCCGAAGGCCGAAATCGAAGGCGAGATG 108468 Query 65759 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACT 65818 || || ||||| ||||||||||| ||||| ||| ||||| ||||||||||||| Sbjct 108469 GGCGATTCCCACGTGGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACC 108528 Query 65819 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 65878 | || |||| | | ||| ||| | ||| |||||||| | ||| ||||||| Sbjct 108529 GCCAACATCAAAAAGTCGAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATC 108588 Query 65879 GGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 65938 ||| || | | |||| |||||||||||| |||||||| || ||| ||||||| Sbjct 108589 GGCGTGATGTTCGGCAGCCC---CGAGACCACCACTGGCGGCAATGCGCTGAAGTTCTAC 108645 Query 65939 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 65998 ||||| || |||||||| |||| ||||||| | | |||| | |||||||||| || Sbjct 108646 GCCTCGGTGCGCATGGACATCCGCCGCATCGGTGCGGTGAAGAAGGGCGATGAGGTGATC 108705 Query 65999 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 66058 ||| ||||| || ||||| || ||||||||| |||| |||||| ||| | ||| Sbjct 108706 GGCTCGGAAACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCTCCGCCGTTTCGCCAGGCC 108765 Query 66059 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 66118 |||||| || | ||||| |||||| |||||| || | ||| || |||| |||| | Sbjct 108766 GAGTTCGAGATCCTCTACGGCGAGGGCTCCTCGCGCGAAGGCGAGATCATCGAACTGGGC 108825 Query 66119 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACG-- 66176 ||| ||||| |||| | | ||||| |||||||||| || ||| || | || || Sbjct 108826 GTGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGGGC--GACCGTA 108883 Query 66177 TCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCGACT 66236 ||| ||||||||| || | ||||| ||||||| |||||||| |||| || || Sbjct 108884 TCGGCCAGGGCAAGGAAAACGTGCGCCAGTTCCTCAAGGACAACCCGGCCATCGCCAACG 108943 Query 66237 CCATCGA 66243 ||||| Sbjct 108944 AGATCGA 108950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237054386990368