Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq938 201 1e-46 seq27778 93.3 5e-14 seq29893 89.7 6e-13 seq21126 87.8 2e-12 seq20001 87.8 2e-12 seq2665 86.0 7e-12 seq7459 82.4 8e-11 >seq938 Length=1173706 Score = 201 bits (222), Expect = 1e-46 Identities = 497/739 (67%), Gaps = 15/739 (2%) Strand=Plus/Plus Query 92913 CGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAA-ATCACAATTCATT 92971 ||| || ||||||||| || ||||| || ||||||||| |||||| |||| ||||||| Sbjct 1020563 CGTTCAGTAATCTATCGGCCACAAACTCGATGTACTGACTCATCAATATCA-AATTCATC 1020621 Query 92972 CCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTC 93030 || | || || | ||| ||||| ||| | ||| || |||| ||| | || || || Sbjct 1020622 CCCACCAATGCGCA-AGGAAGAGCATCGCAGACGAATTCCCTCTCTATTTCCACCGCATC 1020680 Query 93031 TTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATT 93088 || | | | ||||| || | | | | || | | || || ||||| Sbjct 1020681 CCGCACCAGGCCCTTCACTCT-CTCCTCGCTCAGCTTCATCCTCAGCA-AACCGTACAAC 1020738 Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 | ||| || |||||| || | ||| ||||||| || || | ||| ||| || ||| Sbjct 1020739 AGGCATGCGAAGTCGCAGTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAAAAGTT 1020798 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA-CTACCAGaaaa 93207 || ||||| | || || |||||||| | ||||||||| | ||| || || || || || Sbjct 1020799 AATCCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGGC-GCAGAAGCTCCCGGAGAA 1020857 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267 ||||| || || ||| ||||| || | | || ||||||||| | |||| | Sbjct 1020858 GAATATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGAT---CC 1020914 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| || ||||| | ||| || |||| | || || | ||| || ||||| Sbjct 1020915 GTCGATCCAACGTAGGGCCCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAATAGC 1020974 Query 93328 GTTAAATAGGTAATCTCG-CTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 || ||| | ||| |||| |||||||| |||||||| |||| | ||| | Sbjct 1020975 TCGGAAGAGGCGA-CTCTTCTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTGT 1021033 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 |||| || || |||| ||||| |||||||| ||||||||||| || | || || | Sbjct 1021034 ACATCTCGGAGTGGATGTTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGCCTCGG 1021093 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | ||| ||||||| || || | | ||||| || || || |||||||| | Sbjct 1021094 AAACCTGGACTTCTTTCATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGGAGG 1021153 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCC 93566 | ||||| || |||| | ||| || || ||||| |||||||| | | || |||| Sbjct 1021154 CAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGCTTCCC 1021213 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | | || || || | || | ||| || || ||| | |||||||| || ||||| || | Sbjct 1021214 AGTGGGCGAGGTCCTGCGACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGGCCT 1021273 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| ||||| || Sbjct 1021274 TCTTGTACATTTCCCAAAT 1021292 >seq27778 Length=701058 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 609475 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 609416 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| || ||||| ||||||| || || || Sbjct 609415 GTGGGTTCAAATCCCACTTCTGACAAGTTCTTTTT 609381 >seq29893 Length=995234 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 302866 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 302925 Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348 |||||||| || ||||| ||||||| Sbjct 302926 GTGGGTTCAAATCCCACTTCTGACAA 302951 >seq21126 Length=987439 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 142520 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 142461 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 142460 GTGGGTTCAAATCCCACTTCTGACA 142436 >seq20001 Length=614587 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 268394 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 268335 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 268334 GTGGGTTCAAATCCCACTTCTGACA 268310 >seq2665 Length=482417 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 117539 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 117482 Query 126328 TTCGAACCCCACACCTGACAAATT 126351 ||| || |||||| ||| |||||| Sbjct 117481 TTCAAATCCCACAGCTGTCAAATT 117458 >seq7459 Length=630034 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 244003 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 243946 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||| || |||||| ||| || | |||| ||||||| || Sbjct 243945 TTCAAATCCCACAGCTGTCATCATCATATTTAAATTTTTTTT 243904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554064300748480