Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq33253 95.1 2e-14 seq18859 95.1 2e-14 seq31269 93.3 9e-14 seq18683 93.3 9e-14 seq4185 93.3 9e-14 seq27600 87.8 4e-12 seq17582 86.0 1e-11 >seq33253 Length=352486 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 190028 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 189969 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||| |||| ||||| Sbjct 189968 CCCCACGGTGGGC-GAAGT 189951 >seq18859 Length=21703 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 2210 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2151 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||| |||| ||||| Sbjct 2150 CCCCACGGTGGGC-GAAGT 2133 >seq31269 Length=77798 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 69638 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 69697 Query 142563 CCCCAC 142568 |||||| Sbjct 69698 CCCCAC 69703 >seq18683 Length=636309 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 241811 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 241870 Query 142563 CCCCAC 142568 |||||| Sbjct 241871 CCCCAC 241876 >seq4185 Length=266478 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 48316 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 48375 Query 142563 CCCCAC 142568 |||||| Sbjct 48376 CCCCAC 48381 >seq27600 Length=535157 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 282089 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 282030 Query 142563 CCCCAC 142568 |||||| Sbjct 282029 CCCCAC 282024 >seq17582 Length=745959 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 218665 CAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAG 218724 || || |||||||||||||||||| ||| | |||||||| || || |||||||| Sbjct 549794 CAATTCTCTGGTTATGTATCCGAACATTCAGCTTACCATCATGGCGAACAGAGTCTTGCC 549735 Query 218725 GGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTC 218784 || |||| | || ||||| ||||| || || ||||| |||||||| || | || Sbjct 549734 AGTACCATCATTGGTATGGCTCAGGATTACGTAGGCAGCAACAACATAAATCTTCTTAAG 549675 Query 218785 CCCAACGGTCAGTTTGG 218801 || || |||||||| || Sbjct 549674 CCTAATGGTCAGTTCGG 549658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1022546064033432