Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq23032 111 1e-19 seq25453 96.9 2e-15 seq191313 89.7 4e-13 seq18673 84.2 2e-11 seq25458 82.4 5e-11 >seq23032 Length=1100947 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || || || || || ||||||||||| |||| |||| | || Sbjct 134210 ATGCAAATATTTGTGAAGACTTTGACCGGAAAAACCATTACGTTGGAGGTGGAAAGCTCA 134269 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| || ||| || || |||||| | || | |||| Sbjct 134270 GACACAATAGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCCCCAGACCAG 134329 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | ||||||||||| || || || |||||| || ||| | || || ||||| Sbjct 134330 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTCGCAGACTACAAC 134389 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 |||||||| || || ||||||||| | || | ||| | || || || || ||| Sbjct 134390 ATTCAGAAAGAGTCCACTCTTCATCTTGTCCTCCGTCTCCGTGGTGGTTACTAA 134443 >seq25453 Length=344677 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| |||| || | || || || || || || | || |||| | | Sbjct 136997 AATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACTATCACTCTTGAGGTGGAAAGCTC 136938 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | || | ||| ||||||| || || || ||| | ||| | |||| Sbjct 136937 TGACACAATCGACAATGTGAAGGCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 136878 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||||| ||||| || || || ||||| || ||| | || | || |||||||| Sbjct 136877 GCAGAGACTGATCTTCGCAGGGAAGCAACTTGAGGATGGCAGGACCCTTGCAGATTACAA 136818 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||||||||||||||| || | || ||||||| | ||||| Sbjct 136817 TATACAGAAGGAATCTACTCTACACCTTGTGCTACGTTTGAGGGGAGG 136770 >seq191313 Length=592 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| ||||||| | || || || ||||| || | || || | Sbjct 567 AATGCAGATTTTTGTTAAAACTCTCACAGGAAAGACCATCACTCTCGAGGTCGAGAGTTC 508 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAA 21949 || || | | | || ||||| ||||||| || ||||| ||| | ||||| | Sbjct 507 TGATACCATAGACAATGTTAAGGCAAAAATTCAGGACAAAGAAGGTATCCCACCTG---A 451 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| |||||| | ||||||||||| || || || |||||| | ||| | || || || Sbjct 450 CCAGCAGAGATTGATCTTTGCTGGGAAGCAGCTCGAAGATGGACGAACGCTTGCTGACTA 391 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||| ||||| ||||| ||| | || | || || |||| || Sbjct 390 CAATATTCAGAAAGAATCAACTCTGCATCTTGTGCTTCGGTTGAGAGGGGG 340 >seq18673 Length=525508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 460604 AATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTTGAAAGTTC 460545 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 460544 TGACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCA 460485 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 460484 GCAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAA 460425 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 460424 CATCCAGAAGGAATCGACTCTGCATCTGGTCTTGCGGTT 460386 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 460147 ATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTTGAAAGTTCT 460088 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 460087 GACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 460028 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 460027 CAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAAC 459968 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 459967 ATCCAGAAGGAATCGACTCTGCATCTGGTCTTGCGGTT 459930 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || | || ||||| || ||||| | || || | | Sbjct 460919 ATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACTATTACTCTCGAGGTTGAGAGCTCC 460860 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| |||||| |||||||| ||| | ||| | || Sbjct 460859 GACACCATAGACAATGTGAAGGCGAAAATTCAGGATAAAGAAGGTATTCCTCCTGATCAG 460800 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || |||||||| || || || || || ||| | |||| | || ||||||||| Sbjct 460799 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAGGATGGACGAACTCTAGCGGATTACAAT 460740 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 || ||||| || |||||||| || Sbjct 460739 ATCCAGAAAGAGTCTACTCTCCA 460717 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 498069 ATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTTGAAAGTTCT 498010 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 498009 GACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 497950 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 497949 CAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAAC 497890 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 497889 ATCCAGAAGGAATCGACTCTGCATCTGGTCTTGCGGTT 497852 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 498525 ATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTTGAAAGTTCT 498466 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 498465 GACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 498406 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 498405 CAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAAC 498346 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 498345 ATCCAGAAGGAATCGACTCTGCATCTGGTCTTGCGGTT 498308 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 498981 ATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTTGAAAGTTCT 498922 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 498921 GACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 498862 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 498861 CAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAAC 498802 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 498801 ATCCAGAAGGAATCGACTCTGCATCTGGTCTTGCGGTT 498764 >seq25458 Length=394795 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | || ||| | || || ||||||||||| | || ||| | Sbjct 385427 ATGCAGATATTTGTCAAGACACTGACTGGGAAAACCATTACATTAGAGGTCGAAAGTTCT 385486 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || ||| || ||||| || | ||| |||| Sbjct 385487 GACACGATAGACAACGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAG 385546 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | || ||||| |||||||| || |||||| | ||| | || ||||| || Sbjct 385547 CAGCGATTGATATTTGCAGGCAAACAGCTCGAAGATGGCAGAACACTCGCGGATTATAAC 385606 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTT 22051 || ||||||||||| ||||| ||| |||| || || || Sbjct 385607 ATCCAGAAGGAATCAACTCTGCATCTGGTCTTGCGGTT 385644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356371294740208