Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq35681 109 1e-19 >seq35681 Length=3718 Score = 109 bits (120), Expect = 1e-19 Identities = 282/423 (67%), Gaps = 20/423 (5%) Strand=Plus/Minus Query 4656 GTCGATGAATACGCACATGAGCAGGTTGGCGAAATCGAGTTCGCTGTACTCCAGGCGCAG 4715 ||||||||| |||||||| ||| | |||| |||| ||||||||| |||| Sbjct 454 GTCGATGAACTTGCACATGAACAGCTGTTCGAAGCGCTCTTCGTCGTACTCCAGCTGCAG 395 Query 4716 CTGGTCGAGGTCGAACAGGTTGCAGCCGCCGCGGAGCGCATCCTCCACCGTCACGATTTG 4775 | || |||||||||||||||||||||||| || || || | | ||| | || | Sbjct 394 GCGCTCCAGGTCGAACAGGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTT 335 Query 4776 GCGCCACTGGCCGTCCGCGCAGCGCATGCCGTCGCGAAGCGCGGCGTGGCTCAGGTCGA- 4834 ||||||||| ||||||| ||| | |||| | | | | || | ||| || | | Sbjct 334 GCGCCACTGCCCGTCCGGGCACAACGCGCCGGCATGGATCTGCGCTTCGCT--GGGCCAC 277 Query 4835 -GCTTGATCTGTTTGTCCTTGGCCTTGCCGCGGTTGAACAGTGCGCCGGACCAGAACGGA 4893 || | || | | ||| | ||||| | | |||| |||||| |||| ||||| Sbjct 276 GGCCCGGCCT-TCTTTCC--GCGCTTGCTGTTGCGGAACTCCTCGCCGGTCCAGTACGGA 220 Query 4894 TAGGCCTCATGCG---ACAAGCTGGACGGCGTGGAGAAGTAGGTCTGACGCCAGTGCTTG 4950 || |||| |||| | |||| |||||||||||||||||| | ||||| ||| Sbjct 219 TATGCCTGGTGCGTTACCGCGCTG---GGCGTGGAGAAGTAGGTCAGGCGCCA---CTTT 166 Query 4951 TGGAT----CGCCATGCCGGAGGCGACCTTGCGCAGTTCCTGGAAGCGCGGCACCCAGAA 5006 || || ||||| || ||| ||| | |||| | |||||| || | |||||| Sbjct 165 TGCATGCGAGGCCATCGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAA 106 Query 5007 GTATTCATCGAAGTACAGGTTGCCGTGATACGACTGCGCGGTGCGGGCGTTCGTGCCGAG 5066 ||| |||| ||| | || |||||| || |||||| ||| | |||||| ||| Sbjct 105 CACTTCGTCGATGTAGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAG 46 Query 5067 AAA 5069 ||| Sbjct 45 AAA 43 Score = 84.2 bits (92), Expect = 5e-12 Identities = 155/223 (70%), Gaps = 16/223 (7%) Strand=Plus/Minus Query 4168 ATGGACATGAACGACGCGGCGAAGTCCGTCCAGCCGGCGTCGAACTCCAGCCTGCCCTTG 4227 || |||| ||||| ||| |||| || ||||| ||||| || | || | ||| |||| Sbjct 936 ATCGACAGGAACGCCGCCGCGACCTCGGTCCAACCGGCATCCCATTCGA---TGCGCTTG 880 Query 4228 CT---GATCACGTCGTGCGCCTTGAGCACCAGGGCGGTTTTCACGTCCACGGAATAGGTG 4284 | ||||||||| || ||||||||||||||||| | ||| | |||| | || ||| Sbjct 879 CCCTGGATCACGTCCTGGGCCTTGAGCACCAGGGCATTCTTCGCCTCCAGGCTGTA-GTG 821 Query 4285 AAGCCTTCGGCAT---CCGGACG--GAACTTCTGCACCAGGCGGAACACCGCATCGCCGA 4339 || |||| | |||| | ||| | | ||||||| ||||||| | | |||| Sbjct 820 AA----TCGGAGTAGCCCGGGGGAAGAAGTCTTTCACCAGGTCGAACACCCCGTAACCGA 765 Query 4340 TGCCGGTCCGGTCGATGCCCACGTAGGCGACGTCGTAGCGCTC 4382 |||||| ||||||||| | || ||||| | ||||||| Sbjct 764 CGCCGGTAATGTCGATGCCGATGTGCTGGACGTTGAAGCGCTC 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123319247644128