Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7521 91.5 1e-13 >seq7521 Length=567817 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/242 (69%), Gaps = 22/242 (9%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 ||||||||| | || ||||| || || ||||| || ||||||||||||||||||||| Sbjct 336662 GAAACCTCCACGGAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATC 336721 Query 33957 TGCCAATTGTCGCT--CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || ||| ||| || | || |||| |||||||| ||||| |||| | |||||| ||| Sbjct 336722 TG-CAAGAGTC-CTACCATCCTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCC 336779 Query 34015 ACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT 34074 || | || ||| ||||| ||| | ||| | ||| ||||| | | Sbjct 336780 GGTGGGATGCCCTCCTTGTC---------TTGAATCTTGGCCTTGACATTATCAATGGTG 336830 Query 34075 TC---GCATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGC 34125 || || ||||||| || || || ||||| || | |||||||| ||||| ||| Sbjct 336831 TCTGAGCTTTCGACCTCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTCACGAAGATCTGC 336890 Query 34126 AT 34127 || Sbjct 336891 AT 336892 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 ||||||||| | || ||||| || || ||||| || ||||||||||||||||||||| Sbjct 368707 GAAACCTCCGCGGAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATC 368648 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 ||| | || | || |||| ||||| || ||||| |||| | |||||| ||| Sbjct 368647 TGCAAGAGTTCTACCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCCGG 368588 Query 34017 CGGCACGCTCTCTTTGTC 34034 || | || ||| ||||| Sbjct 368587 TGGGATGCCCTCCTTGTC 368570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395118242525104