Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq33775 118 4e-22 >seq33775 Length=276061 Score = 118 bits (130), Expect = 4e-22 Identities = 221/320 (69%), Gaps = 16/320 (5%) Strand=Plus/Plus Query 6584 CTTTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTTCATC 6643 || |||||| ||||||| | || | || | |||||||||||| | | | ||| Sbjct 192378 CTGTGGGACATGATCATGGTCTCCACGTACGACTACGCGGAGCCGGGCTTCATCCTGATC 192437 Query 6644 GACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACGAACCCC 6703 ||| | ||||| ||||||||| ||||| |||||| |||| |||||| ||||| Sbjct 192438 GACAAGGTCAACGAGATGAACAACAACTGGTGGTGCGAGCACATCCGCGCCACCAACCCG 192497 Query 6704 TGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACCTGGTC 6763 ||||| |||||||| || ||||||||||| ||||| || | ||||| ||||||| | Sbjct 192498 TGCGGAGAGCAACCACTTCCGCCCTACGGCTCCTGCCTGCTCGGCTCGGTCAACCTCACC 192557 Query 6764 AAGTACATCTACAAGGACGGCGCGGGCTG-CTTCGC-CTTCGACTGGGACCAGTACCGCG 6821 | | | | | | | | ||||| | ||| ||||||||||||| ||||||||| Sbjct 192558 ACCTTC--GTGCGCGACCCGTTCGGGCCGAAGGCGCGCTTCGACTGGGACGAGTACCGCG 192615 Query 6822 AGGACATCCCGCAGGTGGT---CCGCGCGATGGACAACGTGGTGGATCGCGCGATCTATC 6878 ||| | | || | | |||| | |||||||||||||||| |||| | Sbjct 192616 AGG---TGGTGAAGATCTTCACCCGCATGCTGGACAACGTGGTGGA------GATCAACG 192666 Query 6879 CGCTGCCGCAGCAGAAGCAG 6898 ||||||| |||| ||||| Sbjct 192667 GCCTGCCGCTGCAGCAGCAG 192686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186704996982000