Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq938 150 2e-31 seq29890 104 3e-17 >seq938 Length=1173706 Score = 150 bits (166), Expect = 2e-31 Identities = 374/565 (66%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| | ||||| || || || || || | |||||||||||| || Sbjct 1020756 GTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAAAAGTTAATCCTGGCATGAGGCC 1020815 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 || ||||||||||| || || || || || || |||||||| || ||||| || || Sbjct 1020816 GCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGGAGAAGAATATCCCCTCAACGCA 1020875 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 || || || | || ||||| ||||| || || | ||| | ||| | || Sbjct 1020876 AGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGA---TCCGTCGATCCAACGTAGGGC 1020932 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||||| ||||| ||||| | || ||||| || | || ||| ||||| |||| Sbjct 1020933 CCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAATAGCTCGGAAGAGGCGACTCTT 1020992 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 || | | |||||||||||| | || | || || | ||| ||||| Sbjct 1020993 CTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTGTACATCTCGGAGTGGA--TG 1021050 Query 126358 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 ||| || ||| ||| | |||| || | |||||| ||| | ||| || || | Sbjct 1021051 TTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGCCTCGGAAACCTGGACTTCTTTC 1021110 Query 126416 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 126475 || || | | |||||| ||||| || |||||||| ||||||| || ||||| Sbjct 1021111 ATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGGAGGCAGCAAAGAAGGCCAGA 1021170 Query 126476 ATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCAAGATCCTTC 126535 | || || ||||| | || |||| | | |||| | ||||| | | || |||| | Sbjct 1021171 ACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGCTTCCCAGTGGGCGAGGTCCTGC 1021230 Query 126536 GAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAA 126595 || | |||||||||||| || |||||| | || |||||||| || | ||||||| Sbjct 1021231 GACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGGCCTTCTTGTACATTTCCCAA 1021290 Query 126596 AGGTGGGGATACTTCAGGGGGAACA 126620 | || || |||| | |||||||| Sbjct 1021291 ATCTGAGGGTACTCAATGGGGAACA 1021315 >seq29890 Length=111316 Score = 104 bits (114), Expect = 3e-17 Identities = 180/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || || ||||| | |||||| | || |||||||| |||||| ||||| || || Sbjct 72441 GTGCAGCCCTTCGTCTCTGGAGATTAACTCGTTCGAGAAAGTCAGTCCCGGCATTAGCCC 72500 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||| || | |||||| || | || || || || ||||| || || || ||||| Sbjct 72501 TCGCTTTTTGAGCCAGAATATGGAGCAGAAGCTTCCGGAAAAGAATATACCTTCGACACA 72560 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| || | | ||||| ||||| || |||| || | ||| | || Sbjct 72561 AGCGAAGGCCACTATTCGCTCCGCAAACGACTCCGACCCC---TCGATCCAGCGGAGGGC 72617 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||||| ||||| ||||||| || |||| ||| | |||||| | ||||| ||||| Sbjct 72618 CCACTTGGCCTTCGTCTCGATGCAGGGGATGGTTTCGATCGCGTGGAAGAGCAGGTTCTT 72677 Query 126298 TTCTGATGGATCTTTGATGTA 126318 || | | |||||||||||| Sbjct 72678 CTCCGCGGAATCTTTGATGTA 72698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594353749956160