Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq33774 302 2e-77 >seq33774 Length=113159 Score = 302 bits (334), Expect = 2e-77 Identities = 574/843 (68%), Gaps = 9/843 (1%) Strand=Plus/Plus Query 65907 GACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCG 65966 |||||| | ||||||| ||| | | |||||| ||| || ||| | || || ||| Sbjct 108103 GACACCGTGTCCACCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGCGGCCTGCCG 108162 Query 65967 AGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTC 66026 | ||||| || | ||||||||||| || || || || || ||| | ||| || ||| Sbjct 108163 CGCGGCCGCGTGATCGAGATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTG 108222 Query 66027 CACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACAT 66086 || | | | ||||| ||||||| ||| |||| ||||| | | |||||||||| || Sbjct 108223 CAGGTGATCGCCAACTGCCAGAAGAACGGCGGCACTGCCGCGTTCGTCGACGCCGAGCAC 108282 Query 66087 TCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTG 66146 | ||||| || || ||||| ||| || ||| | || ||| | || |||| Sbjct 108283 GCGCTCGATCCCACCTATGCCGCCAAGCTGGGCGTGAACGTGGACGACCTGCTGGTCTCC 108342 Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206 ||||| ||||| ||||| ||||| ||||| |||| ||| | || || || |||| | Sbjct 108343 CAGCCCGACACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGCTCCGGCGCG 108402 Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266 || | | || || ||||| || || || || ||| ||| || ||||||| Sbjct 108403 GTGGATGTGGTGGTGGTCGACTCGGTCGCCGCATTGACCCCGAAGGCCGAAATCGAAGGC 108462 Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326 || || || || || ||||| |||||||| |||||||||||| ||||| |||||||| Sbjct 108463 GAGATGGGCGATTCCCACGTGGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAG 108522 Query 66327 CTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAG 66386 || |||| || || | | ||| || | | | || ||| | ||| | Sbjct 108523 CTCACCGCCAACATCAAAAAGTCGAACTGCCTGGTGATCTTCATCAACCAGATCCGCATG 108582 Query 66387 AAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGC 66446 |||||||| |||| | |||| ||||||||||| || || || || ||| Sbjct 108583 AAGATCGG---CGTGATGTTCGGCAGCCCCGAGACCACCACTGGCGGCAATGCGCTGAAG 108639 Query 66447 TTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAG 66506 ||||||||||||||||| ||||| ||||| | |||| | | |||| | ||||||||| Sbjct 108640 TTCTACGCCTCGGTGCGCATGGACATCCGCCGCATCGGTGCGGTGAAGAAGGGCGATGAG 108699 Query 66507 GCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGC 66566 | ||||| || ||||| ||||| || ||||||||| |||| || ||| ||| Sbjct 108700 GTGATCGGCTCGGAAACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCTCCGCCGTTTCGC 108759 Query 66567 CAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGAC 66626 ||||| ||||| ||| |||||||||||||| || ||||| | || || |||| Sbjct 108760 CAGGCCGAGTTCGAGATCCTCTACGGCGAGGGCTCCTCGCGCGAAGGCGAGATCATCGAA 108819 Query 66627 ATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAG 66686 ||| ||| | | || ||| | ||||| || ||||||| || ||| || | | Sbjct 108820 CTGGGCGTGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGGGCGAC 108879 Query 66687 AACATCGGCCAGGGCAAGCCCAAGACCGTG---CAGTGGCTGAAGGACAACCCGGACGTC 66743 ||||||||||||||| | | |||| |||| || ||||||||||||| | || Sbjct 108880 CGTATCGGCCAGGGCAAG---GAAAACGTGCGCCAGTTCCTCAAGGACAACCCGGCCATC 108936 Query 66744 GCC 66746 ||| Sbjct 108937 GCC 108939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241283179450784