Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq33768 136 2e-27 seq78578 116 1e-21 seq33802 89.7 2e-13 >seq33768 Length=156001 Score = 136 bits (150), Expect = 2e-27 Identities = 235/338 (70%), Gaps = 19/338 (6%) Strand=Plus/Plus Query 9110 CATGGCATCCG---TCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 9166 ||||||| || ||||||| |||||| |||||||||| || |||||||| |||||||| Sbjct 53116 CATGGCACGCGGCATCAACAAGGTCATCATCGTCGGCAACCTAGGCGCCGATCCGGAAAC 53175 Query 9167 CCGCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTA 9226 ||||||| | |||||| ||| ||| ||| | || |||| || | || | | Sbjct 53176 CCGCTACACCGGCAGCGGCACCGCCATCACCAGCCTGCGCATCGCCACTTCGGAACAGTG 53235 Query 9227 CAAGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTT 9286 | |||||| |||||||||| | |||| ||||| ||||||||||| | || Sbjct 53236 GACCGACAAGCAGAGCGGCGAGCGCCAGGAGCGCACCGAATGGCACCGCGTGAAGCTGTT 53295 Query 9287 CGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGC--GCATCGGTCTACATC 9344 |||| || |||||||||| || |||| |||| || ||| ||| |||||||||| Sbjct 53296 CGGCAAGCTGGCCGAGATCGCCGGCGAGTACCTGAAGAAAGGCCGGCA--GGTCTACATC 53353 Query 9345 GAGGG------GCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTAC 9398 ||||| ||||| | ||| |||| || | |||| || |||||| Sbjct 53354 GAGGGTTCGCTGCGCACC--GAC----AAGTACACCGACAAGGACGGCATCGAGCGCTAC 53407 Query 9399 ACGACCGAGATCGTCGCCGACAGGATGCAGATGCTCGG 9436 | ||||| ||| ||||| || |||||||||||| || Sbjct 53408 TCCACCGACATCATCGCCAACGAGATGCAGATGCTGGG 53445 >seq78578 Length=1014 Score = 116 bits (128), Expect = 1e-21 Identities = 210/303 (69%), Gaps = 7/303 (2%) Strand=Plus/Minus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 |||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 538 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 479 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 || |||| |||| | | || || || || || | ||| ||| || || ||| Sbjct 478 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 419 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGC 9298 || |||| || |||| ||||||||||||||||| | ||||||||| |||| Sbjct 418 GACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGC 359 Query 9299 CGAGATCGTCGACGAGCACCTTCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCATC 9356 ||| |||| | ||| | || || ||||| || | || |||| |||| || || Sbjct 358 CGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTCTC 301 Query 9357 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCGCC 9416 || || |||| ||| || ||| | | |||||||| ||||||||||||| | Sbjct 300 CGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCGTC 244 Query 9417 GAC 9419 ||| Sbjct 243 GAC 241 >seq33802 Length=298597 Score = 89.7 bits (98), Expect = 2e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 7203 TGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGT 7262 ||||| |||||||||||||| |||| | | || | |||||| | | ||||||| ||||| Sbjct 4124 TGGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGTGTAAGCGT 4183 Query 7263 ATCGTGAGTTCGAATCTCACCGCCTCCGCCAG 7294 | |||| ||||||||| |||| ||||||||| Sbjct 4184 ACCGTGGGTTCGAATCCCACCCTCTCCGCCAG 4215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199581171874272