Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq33802 172 1e-38 >seq33802 Length=298597 Score = 172 bits (190), Expect = 1e-38 Identities = 285/406 (70%), Gaps = 9/406 (2%) Strand=Plus/Minus Query 8755 CGCGAATGCGGCCGGCTCGGGATGATTGTCGTTGACTACCTGCAGCTGATGTCGGGTGAC 8814 ||||| |||| | || || |||| || | |||||||||||||||||| | |||| | Sbjct 56588 CGCGAGCACGGCGGCCTGGGCCTGATCGTGATCGACTACCTGCAGCTGATG-CAGGTGCC 56530 Query 8815 GGCGGCGGATCT--GAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAAC 8872 | ||| | || | || ||||||||| | | ||||| ||||| |||| || Sbjct 56529 CG----GGAACAAGGAGAACCGCGCCACCGAGATTTCAGAAATCTCGCGTTCACTGAAGG 56474 Query 8873 AAATTGCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCG 8932 | || |||||||| |||| || | ||||| || |||||| | || || ||| | Sbjct 56473 GGCTCGCCAAGGAACTGAACGTGCCCGTGATCGCCCTCTCGCAGTTGAACCGCTCGCTGG 56414 Query 8933 AGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGC 8992 | | ||| | ||||||| || | |||||||| |||||||||||||| || ||||||| Sbjct 56413 AACAGCGCGCCGACAAGCGCCCGATGATGTCCGACCTGCGCGAGTCGGGCGCCATCGAGC 56354 Query 8993 AGGATGCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAG 9052 |||| |||||||||||| | || ||||||||||| ||| ||| ||| || || | Sbjct 56353 AGGACGCCGACGTGATCATGTTCATCTACCGCGACGAGTACTACAACAAGGAATCGGCGG 56294 Query 9053 ATCGCGGTACGGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTAC 9112 | || |||||| |||||||| | |||||||| ||||| || | | |||||| Sbjct 56293 ACAAGGGCCTGGCCGAGATCATCATCGGCAAGCAGCGCAACGGCCCCACCGACACCGTCA 56234 Query 9113 GGCTCGCATTCC-AGAACGCAACAACCCGGTTCGAGAATTTCGCCG 9157 ||| | |||| | | | || ||| ||||||||| | ||||| Sbjct 56233 AGCTGACCTTCCTCGGCCACTAC-ACCAAGTTCGAGAACTACGCCG 56189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126937104813792