Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq29890 114 2e-20 seq938 95.1 2e-14 >seq29890 Length=111316 Score = 114 bits (126), Expect = 2e-20 Identities = 541/849 (64%), Gaps = 43/849 (5%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| || || ||||| |||| | | ||| ||||| | |||| || | Sbjct 72155 TCTTCTCGAAGAAATTTGTCTTCCCCTGAAGGCTGATTAGCTCCATCCAGTCGAACGGAT 72214 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| | | || || ||||| | |||| ||||| |||||| || ||||||||||| | Sbjct 72215 TCTGCGCATGGTACAGCTTCCCATATCCCAGAGCAATCAGCAATCTATCTGCCACAAACT 72274 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA--GCCTAACGGGGAGCGCTTC 159825 | ||||| | |||| || | ||| || |||| || || | ||| || || || Sbjct 72275 CTATGTACTGGCTCATCAAATCGCCGTTCATTCCCACCAATGCGCA--GGGAAGGGCGTC 72332 Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTA 159885 | | || ||| |||| || || || || |||| | ||| || | || | Sbjct 72333 GCAAACGAATTCCCTCTCGATGTCCACAGCGTCGGCGATTATCCCTTTCACCCTGTCCTC 72392 Query 159886 CCCCGGCTTGCC------CAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTG 159939 | |||| | |||| ||| | | ||||||| | ||||||||||| Sbjct 72393 GCTAAGCTTAACTTTCAGCAAACTGTAGAGC--AAACAGGCG-------AAGTCGCAGTG 72443 Query 159940 CAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACG 159999 ||| || ||||| | ||||| |||||||| || | | || |||||||| | ||| || Sbjct 72444 CAGCCCTTCGTCTCTGGAGATTAACTCGTTCGAGAAAGTCAGTCCCGGCATTAGCCCTCG 72503 Query 160000 CGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCG 160058 | ||||||||| || |||| ||| |||| ||| ||| || || || || || | Sbjct 72504 CTTTTTGAGCCAGAATATGG-AGCAGAAGCTTCCGGAAAAGAATATACCTTCGACACAAG 72562 Query 160059 CAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCC 160118 | || ||||| | | ||| |||| || | | | | | |||| | ||||| Sbjct 72563 CGAAGGCCACTATTCGCTCCGCAAACGA---CTCCGACCCCTCGATCCAGCGGAGGGCCC 72619 Query 160119 ATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCT 160178 | | |||||| | ||||||| || ||| |||| |||| || | || || || Sbjct 72620 ACTTGGCCTTCGTCTCGATGCAGGGGATGGTTTCGATCGCGTGGAAGAGCAGGTTCTTCT 72679 Query 160179 CCTTCACATCCTTGATCAGAGT----AGCAATCAGCTTCGAGTACATTTCTGCGTGCACA 160234 || ||| ||||| ||| ||||| ||| |||||| || | ||| | Sbjct 72680 CCGCGGAATCTTTGATGTAAGTTTCGAGCAAGAGGCT----GTACATCTCGGAGTGGATG 72735 Query 160235 TTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC-AGATACTGCACCTCCTG 160293 || || ||||| ||||||||| |||||| |||||| ||| ||| ||||||| Sbjct 72736 TTCTCTATGGCGATCTGAAAGCCGTAGAAGGCCCGAGCCTCCGAGA-CCTGGACCTCCTT 72794 Query 160294 TGTGAACCTTTGACCC---AGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGC 160350 |||| | | ||| || || | || | ||||||| || || ||||| || Sbjct 72795 CATGAA---TCGGCCCGCAAGGTTCTCCAATACGATGCCGTCGGATGCGGCGAAGAAGGC 72851 Query 160351 CAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCAC 160410 | |||||| ||||||||| ||||||| | || ||||||||| | Sbjct 72852 GAGCACGTGTTTGATGAAATGCTTCTCGTCAGCAGTAAG---AGCGTCCCAGTGTCGGAG 72908 Query 160411 GTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470 || |||| |||||| ||||| || || |||| || || | || | |||||||| Sbjct 72909 ATCCTGGGACAAATCGACCTCCTCAGCCGTCCAGAAGGAGGCTTCGGCTTTCTTGTACAT 72968 Query 160471 GGCCCAGAT 160479 ||||||| Sbjct 72969 CTCCCAGAT 72977 >seq938 Length=1173706 Score = 95.1 bits (104), Expect = 2e-14 Identities = 362/562 (64%), Gaps = 10/562 (2%) Strand=Plus/Plus Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATG 159979 ||||| || |||||||||||||| |||||||| | ||||| | ||||||||| | | Sbjct 1020739 AGGCATGCGAAGTCGCAGTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAAAAGTT 1020798 Query 159980 AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAA 160038 | || ||||||| || || || | |||||| |||| |||| |||| ||| || Sbjct 1020799 AATCCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGG-CGCAGAAGCTCCCGGAGAA 1020857 Query 160039 AAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTC 160098 || |||||||| ||| ||||| || | |||| ||| ||||||| | || | Sbjct 1020858 GAATATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAAGA---TTCGGATCC 1020914 Query 160099 ATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCA-TGCGCTCGACGG 160157 | | |||| | | |||||| | |||||||| | | ||| || | || | || | | Sbjct 1020915 GTCGATCCAACGTAGGGCCCACTTGGCCTTCTTCTCCACGCATGGGACTGTG-TCAATAG 1020973 Query 160158 CGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGT 160217 | || | | || ||| | ||| ||||| || | | ||| || Sbjct 1020974 CTCGGAAGAGGCGACTCTTCTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTGT 1021033 Query 160218 ACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCA 160277 |||| || | ||| | || ||||| || ||||| || ||| || |||||| Sbjct 1021034 ACATCTCGGAGTGGATGTTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGCCTCGG 1021093 Query 160278 GATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGG 160337 | ||| || || | ||||||| | | ||||| | ||| | || |||| || Sbjct 1021094 AAACCTGGACTTCTTTCATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGGAGG 1021153 Query 160338 CCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTT 160397 | |||||||| |||| || || ||||||||| |||| || |||| || Sbjct 1021154 CAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATCGGCAGTGAG---GGCTT 1021210 Query 160398 CCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAG 160457 ||||||| | | ||| || | |||||| ||||| || || ||||| || ||| | | Sbjct 1021211 CCCAGTGGGCGAGGTCCTGCGACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGG 1021270 Query 160458 CAGTTTTGTACATGGCCCAGAT 160479 | | |||||||| |||| || Sbjct 1021271 CCTTCTTGTACATTTCCCAAAT 1021292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791162010101120