Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq11877 132 6e-26 seq938 125 9e-24 seq29893 104 3e-17 >seq11877 Length=307084 Score = 132 bits (146), Expect = 6e-26 Identities = 235/335 (70%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAAA 15976 ||||| ||||| | ||||| ||||| || || |||| ||||| || ||| | ||||| Sbjct 285768 TCAAGAATATCTGCACGATTAGTTGCTGCAATTACAATTATACCAGTATTCCCT-TCAAA 285710 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 ||||||||| ||||| || |||||||| | || || |||| ||||||||| || Sbjct 285709 ACCATCCATTTCTGTTAATAGCTGGTTCAGTGTCTGCTCCCTTTCATCATTTCCTCCACC 285650 Query 16037 ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096 | ||||| | | ||| || || |||||||| ||||||| || || |||||||| Sbjct 285649 AATACCAGTTCCTCTTTGACGCCCAACAGCATCAATTTCATCAACAAATACTATGCATGG 285590 Query 16097 TTGATTTT-CGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAA 16155 ||||| | | | ||| ||| || || || || || ||| || |||||||||| Sbjct 285589 GGCATTTTCCTTGGCCTTCTTGAAA-AGGTCGCGGACTCGTGAGGCTCCAACACCAACAA 285531 Query 16156 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 16214 ||||||| ||||| | | | ||| || | || || || ||| | |||||| ||| Sbjct 285530 ACATCTCAACAAATTCGGAACCTGAA-ATGGAGAAAAATGGCACACCCGCTTCACCAGCA 285472 Query 16215 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||||| ||| || | ||||| || ||||| || Sbjct 285471 ATGGCCTTGGCCAGCAAGGTCTTTCCAGTACCAGG 285437 >seq938 Length=1173706 Score = 125 bits (138), Expect = 9e-24 Identities = 368/564 (65%), Gaps = 5/564 (1%) Strand=Plus/Minus Query 101758 TGTTCCCCCTGAAGTATCCACACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATT 101817 |||||||| | |||| || || | |||||| | || |||||||| || || Sbjct 1021315 TGTTCCCCATTGAGTACCCTCAGATTTGGGAAATGTACAAGAAGGCCGAAGCTTCCTTTT 1021256 Query 101818 GGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAAA 101877 |||| || || ||||||||| | || |||| | | | | ||| | | || | || Sbjct 1021255 GGACAGCCGAGGAGGTAGATTTGTCGCAGGACCTCGCCCACTGGGAAGCCCTCACTGCCG 1021196 Query 101878 ATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTT 101937 |||| ||| | ||||| ||| | | ||||| |||||||||| |||||||| || |||| Sbjct 1021195 ATGAGAAGCATTTCATCAAACATGTTCTGGCCTTCTTTGCTGCCTCCGATGGCATCGTTT 1021136 Query 101938 TTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCT 101997 | |||||| | | || || | || || || || || ||| | | || | Sbjct 1021135 TGGAGAATCTAGCTGGCAGGTTCATGAAAGAAGTCCAGGTTTCCGAGGCGCGCGCGTTTT 1021076 Query 101998 ATGCGTATCA-ATGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGAC 102056 | | | || || || | || | | || |||| |||||| || | || Sbjct 1021075 ACGGATTCCAGATTGCA-ATCGAGAACATCCACTCCGAGATGTACAGTCTTCTGCTCGAA 1021017 Query 102057 AAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCA 102116 | || || || ||| || ||||||| | ||||| ||| || | ||||| ||| Sbjct 1021016 ACATACATCAAAGATTCGGCCGAGAAGAGTCGCCTCTTCCGAGCTATTGACACAGTCCCA 1020957 Query 102117 TGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTT 102176 || | | ||||| || | ||||| | ||| | || | || || ||| Sbjct 1020956 TGCGTGGAGAAGAAGGCCAAGTGGGCCCTACGTTGGATCGACGGA---TCCGAATCTTTT 1020900 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||| || |||| ||||| || |||||||| || |||||||| || ||||||| Sbjct 1020899 GCCGAGCGGCTACTCGCCTTTGCTTGCGTTGAGGGGATATTCTTCTCCGGGAGCTTCTGC 1020840 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 || || | |||| | ||||| || || ||||||||||| | || ||||||||||| Sbjct 1020839 GCCATATTTTGGTTGAAGAAACGCGGCCTCATGCCAGGATTAACTTTTTCCAACGAGCTA 1020780 Query 102297 ATCTCTCGTGACGAGGGACTCCAC 102320 ||||| | |||||||| || ||| Sbjct 1020779 ATCTCGAGAGACGAGGGTCTGCAC 1020756 >seq29893 Length=995234 Score = 104 bits (114), Expect = 3e-17 Identities = 194/280 (69%), Gaps = 10/280 (4%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || || ||||| || ||||| ||||| |||||||| || |||| ||||||||| | || Sbjct 40548 AATCCGTCCATTTCAGTCAATAGCTGATTAATAGTCTGCTCCCTCTCATCATTCCC--GC 40605 Query 16035 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 |||| || || | | ||| |||| ||||||||||||||||||||||| || ||| Sbjct 40606 C-ACCAAGCCCTGCCCCTCTCTGCCTTCCAACGGCATCAATCTCATCAATGAAAACAATG 40664 Query 16092 CATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACAC 16149 || ||| ||| || || || | ||||| || |||| || || |||| Sbjct 40665 CAAGGTGCCTTTGACTTTGCTTTCTCGAATAAATCCC--TGACTCTTGAAGCTCCAACAC 40722 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 16209 | ||||||| ||||||||| | || || | |||| || ||| || || | |||| Sbjct 40723 CTACAAACAGCTCCACAAATTCTGAAGCAGCACATGAGAAGAACGGAACGCCGGCCTCAC 40782 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 | | | |||| ||| | ||| || || || ||||| || Sbjct 40783 CAGACACTGCTCTGGCCAAAAGGGTTTTTCCTGTACCCGG 40822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617625093741440