Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq938 147 3e-30 seq11877 129 7e-25 seq29893 105 8e-18 >seq938 Length=1173706 Score = 147 bits (162), Expect = 3e-30 Identities = 374/564 (66%), Gaps = 9/564 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| |||| || || || || || || || || ||||||||||| || Sbjct 1020756 GTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAAAAGTTAATCCTGGCATGAGGCC 1020815 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || |||||||||||| | || |||||||| |||||||||||| || ||||| || || Sbjct 1020816 GCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGGAGAAGAATATCCCCTCAACGCA 1020875 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 ||||| || | || |||||||| || || || | ||| | ||| | || Sbjct 1020876 AGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGA---TCCGTCGATCCAACGTAGGGC 1020932 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 117524 ||| || ||||||||||| | ||||| || || | || ||| || | | |||| Sbjct 1020933 CCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAATAGCTCGGAAGAGGCGACTCTT 1020992 Query 117525 TTCAGATCCATCCTTAATGTATTTGTCAATC--AATTTTGAATATGTTTCGCCATGAACC 117582 || | ||| || |||||| | || | | || || || | ||| || | Sbjct 1020993 CTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTG--TACATCTCGGAGTGGATG 1021050 Query 117583 ATTTCATTATGGCAT-TGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATC 117641 | || | || || || || |||| || | |||||| ||| | ||| ||||| | Sbjct 1021051 TTCTCGAT-TGCAATCTGGAATCCGTAAAACGCGCGCGCCTCGGAAACCTGGACTTCTTT 1021109 Query 117642 CGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 117701 | || || | | |||||| ||||| || |||||||| |||||||||| ||||| Sbjct 1021110 CATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGGAGGCAGCAAAGAAGGCCAG 1021169 Query 117702 GATGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGTCAAGATCTTT 117761 | | || ||||| | ||| |||| || | |||| | ||||| | | || || | Sbjct 1021170 AACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGCTTCCCAGTGGGCGAGGTCCTG 1021229 Query 117762 GGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCTTTTTATAGAGTTCCCA 117821 |||||||| || || || || |||||| | || ||||| || || | |||||| Sbjct 1021230 CGACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGGCCTTCTTGTACATTTCCCA 1021289 Query 117822 GAGTTGTGGATACTTCAGGGGGAA 117845 | || || |||| | |||||| Sbjct 1021290 AATCTGAGGGTACTCAATGGGGAA 1021313 >seq11877 Length=307084 Score = 129 bits (142), Expect = 7e-25 Identities = 232/334 (69%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT-TTCATTATCAAA 9283 ||||| ||||| | ||||| || || || || |||| ||||| || ||| | ||||| Sbjct 285768 TCAAGAATATCTGCACGATTAGTTGCTGCAATTACAATTATACCAGTATTCCCT-TCAAA 285710 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 ||||||||| ||||| || || ||||| | || || |||| ||||||||| || Sbjct 285709 ACCATCCATTTCTGTTAATAGCTGGTTCAGTGTCTGCTCCCTTTCATCATTTCCTCCACC 285650 Query 9344 ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGG 9403 | ||||| | | ||| || || |||||||| ||||||| || || || ||||| Sbjct 285649 AATACCAGTTCCTCTTTGACGCCCAACAGCATCAATTTCATCAACAAATACTATGCATGG 285590 Query 9404 TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAA 9463 |||||| ||| | | || || ||||| || | | ||| || ||||||||||| Sbjct 285589 GGCATTTTCCTTGGCCTTCTTGAAAAGGTCGCGGACTCGTGAGGCTCCAACACCAACAAA 285530 Query 9464 CATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAA 9522 |||||| ||||| | | | ||| || | || || || ||| | |||||| |||| Sbjct 285529 CATCTCAACAAATTCGGAACCTGAA-ATGGAGAAAAATGGCACACCCGCTTCACCAGCAA 285471 Query 9523 TGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 |||| ||| || | ||||| || ||||| || Sbjct 285470 TGGCCTTGGCCAGCAAGGTCTTTCCAGTACCAGG 285437 >seq29893 Length=995234 Score = 105 bits (116), Expect = 8e-18 Identities = 192/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || || ||||| || ||||| || || |||||||| || |||| ||||||||| | || Sbjct 40548 AATCCGTCCATTTCAGTCAATAGCTGATTAATAGTCTGCTCCCTCTCATCATTCCC--GC 40605 Query 9342 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 |||| || || | | ||| |||| ||||||||||||||||||||||| ||||| Sbjct 40606 C-ACCAAGCCCTGCCCCTCTCTGCCTTCCAACGGCATCAATCTCATCAATGAAAACAATG 40664 Query 9399 CATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCA 9458 || ||| ||| || | || || | ||| | || ||| || || ||||| Sbjct 40665 CAAGGTGCCTTTGACTTTGCTTTCTCGAATAAATCCCTGACTCTTGAAGCTCCAACACCT 40724 Query 9459 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 9518 ||||||| ||||||||| | || || | |||| || ||| || || | ||||| Sbjct 40725 ACAAACAGCTCCACAAATTCTGAAGCAGCACATGAGAAGAACGGAACGCCGGCCTCACCA 40784 Query 9519 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 | | |||| ||| | ||| || || || ||||| || Sbjct 40785 GACACTGCTCTGGCCAAAAGGGTTTTTCCTGTACCCGG 40822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587017975420480