Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq35681 107 5e-19 >seq35681 Length=3718 Score = 107 bits (118), Expect = 5e-19 Identities = 650/1022 (64%), Gaps = 69/1022 (7%) Strand=Plus/Plus Query 32565 CACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTT 32624 ||| |||||||||||||||||| || | || ||||||| |||||| | || || Sbjct 63 CACGGCGCAGAGCTACCACGGCCACGTCTACATCGACGAAGTGTTCTGGATCCCCAATTT 122 Query 32625 CCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACG-ACCAGTGGCGGCAGACGT 32683 |||| |||||| | ||| ||| || ||||| || | | ||||||| | ||| | Sbjct 123 CCAGAAGCTGCAGACGGTGGCCAGCGCGATGGCCTCGCATGCAAAAGTGGCGCCTGACCT 182 Query 32684 ATTTCTCGACGCCGTCGAGCC-TCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTG 32742 | ||||| ||||| | || | ||||| | || ||||||| |||| | ||| || | Sbjct 183 ACTTCTCCACGCCCA-GCGCGGTAACGCACCAGGCATATCCGTACTGGACCGGCGAGGAG 241 Query 32743 TTC---AACCGTGGCCGACCGAAAGATCAGCACGTATCGATCGACATTTCGCA-CGCGGC 32798 ||| ||| | || | |||||| || || || | | || || || Sbjct 242 TTCCGCAACAGCAAGCG-CGGAAAGA--AGGCCGGGCCG-------TGGCCCAGCGAAGC 291 Query 32799 GCTGGCC---GCGGGC-CGTTCGTGTCAGGACGGCCAGTGGCGCCAGATCGTCACGGTCG 32854 || | | || ||| |||| ||| | |||||| ||||||||| || || ||||| | Sbjct 292 GCAGATCCATGCCGGCGCGTT-GTGCCCGGACGGGCAGTGGCGCAAGGTCATCACGATTC 350 Query 32855 AGGACGCCGTGCGCGGCGGTTGCAACAGCGGGGCGCGGCCGCTCTTCAATCTCGACCGGC 32914 | |||||| | |||||| |||||| || ||| | || || || | Sbjct 351 AAGACGCCATCGCCGGCGGCTGCAAC---------------CTGTTCGACCTGGAGCGCC 395 Query 32915 TACGACTGGAATACAGCCCCGAGGAATACGCGAACCTGCTGCTGTGCCAGTTCATCGACG 32974 | | ||||| ||| | ||| | || | ||| | ||||| ||||||||||| Sbjct 396 TGCAGCTGGAGTACGACGAAGAGCGCTTCGAACAGCTGTTCATGTGCAAGTTCATCGACA 455 Query 32975 ATTCGCTGTCGGTTTTCCCGCTGACGGTGTTGCAGCCGTGCATGGTCGATACCTGGGAGG 33034 | | | | | ||| | |||| | || ||| ||| ||| || || Sbjct 456 GCACCCAGGCTGCATTCGCCTTGACCGACCTGGAGCGCTGCTATTCCGA---CTTGGGCC 512 Query 33035 TGTGGGACGACTTCAAGCC--ACTGTACCTGCGCCCGTTCGGCGACGAGGAGGTCTGGAT 33092 | ||| |||| | | || || | || ||| ||||||| | || ||||||| | Sbjct 513 TATGGACTGACTACGACCCGGACAG--CCCGCGGCCGTTCGACAACCGCCCGGTCTGGCT 570 Query 33093 CGGCTACGACCC--GTCGCATACGGG-CGACAGCGCCGGCTGCGTGGTGATTGCGCCGCC 33149 ||| || ||||| |||| | || | |||| ||| || ||||| || |||| ||||| Sbjct 571 CGGGTATGACCCCAGTCGAACCCGCGACGAC-GCGACG--TGCGTTGTCGTTGCCCCGCC 627 Query 33150 GAAGCGTCCGGGCGGGAAGTTCCGCGTGCTCGAGCGGTTCCAGTGGCACGGTTTGGACTT 33209 | |||||||| |||||||| | || ||| | | |||| || ||| | Sbjct 628 CCTGGAGCCGGGCGGCAAGTTCCGAATCCTGGAGAAGCACAGCTGGCGGGG----GACGT 683 Query 33210 CG---AGGCG-CAGGCCGCGCAAATCGAAGCGCTGACGCG-GCGCTATCGCGTGACCTAC 33264 || | || ||||| ||| ||||| |||| ||| ||||| ||| || Sbjct 684 CGTTCACGCATCAGGCAAAGCAGATCGAGAAGCTGT-GCGAGCGCTTCAACGTCCAGCAC 742 Query 33265 ATCGGCATTGACACGACCGGGATCGGGCAGGGCGTGTATCAGCTCGTCACGAAGTTTTTC 33324 |||||||| |||| ||||| |||| | || |||| | || || | | || ||| Sbjct 743 ATCGGCATCGACATTACCGGCGTCGGTTACGGGGTGTTCGACCTGGTGAAAGACTTCTTC 802 Query 33325 CCGGCCGCGACGCCGTTCCACTACTCGGTGGAAATCAAGACCGCGCTGGTGATGAAGGCG 33384 || || || ||| | |||||| |||| |||| || |||||| | ||||| Sbjct 803 CCCCGGGCTACTCCGATTCACTACAGCCTGGAGGCGAAGAATGCCCTGGTGCTCAAGGCC 862 Query 33385 CAGAACGTGATCC---GCAAGGGTCGGCTCGAGTTCGACGCCGGCTGGAACGATCTCGCC 33441 ||| ||||||||| ||||| || |||| | || ||||| |||| ||| |||| Sbjct 863 CAGGACGTGATCCAGGGCAAG---CGCATCGAATGGGATGCCGGTTGGACCGAGGTCGCG 919 Query 33442 GCGTCATTCATGGCGATCAAGAAAACCATCACGCCCAGCGGCCTGCAGGTCACGTACAAG 33501 ||| | ||| || |||||||| || |||| |||||||||| | | || |||| Sbjct 920 GCGGCGTTCCTGTCGATCAAGCGCGGCACCACGGCCAGCGGCCT---GATTACCTACAGC 976 Query 33502 GCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCTCGCCTGGGCGTGCATGCACGCGCTG 33561 ||| | | || | | | |||| | ||| | |||||| || |||||| |||||| Sbjct 977 GCGTCTAGGACTGAGGCAACCGGCCATGCCGACGTGGCCTGGTCGATCATGCATGCGCTG 1036 Query 33562 GC 33563 || Sbjct 1037 GC 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118465713905952