Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq33768 347 3e-91 >seq33768 Length=156001 Score = 347 bits (384), Expect = 3e-91 Identities = 1761/2764 (64%), Gaps = 157/2764 (6%) Strand=Plus/Plus Query 33511 CTTGCTGCGTCACAGTGTAAGTTTCATGCAGCTTGCGCGGCACGACGAGTTGCAAACGCT 33570 ||||||| | | ||||| || | |||||| ||||| || ||||||| | || Sbjct 104129 CTTGCTGTGGGGCCGTGTACGTCGCGTGCAGCGGTTTCGGCAGCACCAGTTGCAGATTCT 104188 Query 33571 TCGCTCTCATTTCGTCTGTTTGATGCGCGGAGATCGCCGTTTCCAGCGTCAACAGGTGCT 33630 | | |||||| ||| || | || | ||| | | |||||||| | ||| |||| Sbjct 104189 TGTCCTGCATTTCTGATGTCTGGTTCGTGCTGATGCCGGGCTCCAGCGTGAGCAGATGCT 104248 Query 33631 TG---TCCATGATGCGATCCGCTTCGGCAAGTACTTGACGCCAGCGATCCTTGCAGGTTG 33687 || || || || || || || || || || |||||||||||||||||||| || Sbjct 104249 TGCTGTCGATCTTG---TCGGCCTCAGCCAGCACCTGACGCCAGCGATCCTTGCACGTGC 104305 Query 33688 ACTTCACACCCAACATGGTGAGTTTCATCGGGTCGAATGTTGGATTGTGGTACTCAA-CT 33746 ||| || ||| ||| | || | | ||| || | | ||| ||||| || Sbjct 104306 TCTTGACGGCCAGCATCGACAGCCGCGCAGTTGGGAACGTGGCGTCGTGATACTCCTGCT 104365 Query 33747 -ACGTCGGGGAAGATAAAGTCGGGCTTCGCCTTATTTTCGGTGACGGCTGTCCGTGCGTA 33805 || ||||||| | || || ||||| ||| || || |||| ||||| || ||| Sbjct 104366 GAC--CGGGGAACAGGAAATCAGGCTTGCTCTTGTTCTCTGTGATTGCTGTGCGCCTGTA 104423 Query 33806 CCGGACGCCACATTCAGCAAACAGCAGTTCAAGATGGTTTTCTAAGGCTAGACCGACGCG 33865 |||| ||| | | |||| || || | ||||||||| | || || || || || Sbjct 104424 TCGGATGCCCAAGGTGGTGAACACCACCTCCATATGGTTTTCCAGCGCCAGCCCCACCCG 104483 Query 33866 GCTTTTGCGACGATTTTGAACTGAGAGTGAAAACGATAGAAAGCCGTCAACATCGACGCT 33925 ||| ||||| ||||| || || ||||| || ||| | | ||| || || Sbjct 104484 GCTCTTGCGGCGATTCTGCACGGAGAGCGAGAACCGGA--------TGAAC-TC----CT 104530 Query 33926 GGATTTCGCGGT-GTCGGCGAAACCTTGAGAAAGGCGATCGGCGATAAGGTAGCGTTCAA 33984 | || | || | | ||| || | ||||| |||||||| |||| || || | Sbjct 104531 CGGTTGCCTGGCCGCCATTGAACCCCTCTTGGAGGCGTTCGGCGATCAGGTGCCGCTCCA 104590 Query 33985 GTGTCCGGAACAGAATTTCCTCGCGCTCCATCCATGCCATTAACACTAAGTCTGGCGATT 34044 || |||||||| |||||||| ||||||||||| |||| |||||| ||| || | Sbjct 104591 ACGTGCGGAACAGGATTTCCTCCCGCTCCATCCACGCCAGCAACACTGCGTCGGGATCAT 104650 Query 34045 CATTTGGGTCGATATCCTTCAACGTCGAACGTGCGTAGGCCGAGAATTCGCGGGTTGTTG 34104 || ||||| | ||| || || |||||||||||||| ||| ||| | Sbjct 104651 CACGGACGTCGAGCCCGGACAAGGTGCCCCGCGCGTAGGCCGAGAAGTCGACGGTGCGCG 104710 Query 34105 GAAAGCGACCGGAGAAGCGCTTTAACATCTCTTCGAGATAGCTGTCTTCC-GATGTCTCT 34163 | || | || || ||| | ||| || ||||| ||| | || || | || ||| Sbjct 104711 GGAACTGCCCCTGAAAACGCCCCAGCATTTCGTCGAGGTAGGTTTCCGCCCGCTG-CTCG 104769 Query 34164 ACGGCAATGCCGATGTTTTCGAGAATGAAACGTGAA-GCAAACTCAATACGATCTTGTTC 34222 || | | ||| ||| ||||||| || | ||| || || ||| ||||| ||||| Sbjct 104770 ACCTCCACGCCTATGCTTTCGAGGATCAC-CGTCTCCGCGAAACCAACCCGATCCTGTTC 104828 Query 34223 AGTTTCCAGCTCGGATTTTACGGAGAACCCCGGA------TGAGCCAGATCGACAAATCC 34276 ||||||||||| || || |||||| ||| | ||| ||| || || Sbjct 104829 GGTTTCCAGCTCCGACCGCACTGAGAACTTGGGAAACTCTTCCGCCGC--CGAGAAC-CC 104885 Query 34277 AAACAACCATTCAATCTGGCGGCCGATACTCGATCCGTTCTCGGCAATGATGACAAGCAA 34336 |||| ||| | | |||| | | | || || || ||||| |||| | || |||| Sbjct 104886 GAACAGCCACGCGACCTGGTTGGCAACGCTGGAACCATTCTCCGCAACCAGCACCAGCAG 104945 Query 34337 GCCGC---CATCGCGTTTC----------TTG---------GCAATGAACAGTAGATCGC 34374 |||| ||||| ||||| ||| ||||| | ||| || |||| Sbjct 104946 GCCGGGATCATCG-GTTTCGCCGTCGGCCTTGCGGCGCCTCGCAATCAGCAGCAGGTCGC 105004 Query 34375 CCTCGCTTGCGTTCAGCGAGACCGTAGTAGTC-GGAAAGTAAAACCTGAATTCTGGACTT 34433 ||||||| || || |||| ||| || ||| ||||||||||| | | |||| | || Sbjct 105005 CCTCGCTGGCCATCTGCGACACCTGGGT-GTCTGGAAAGTAAAAGCGGTATTCCGAACG- 105062 Query 34434 CGTGGTTTTCCCTTTCGAAATTGCCCCTTCCGACAGTTGTACAGCGTCAGAAAGGCATCC 34493 ||||| | | ||| | ||| || ||||||||| || ||| ||| Sbjct 105063 CGTGGGGTGC------------GCCGC--CCGCGCGTCGTACAGCGTGAGCGTGGCGTCC 105108 Query 34494 TCGACGATAGGATCGGGATCATCGTCGTTAACGTAAACATATCGCGCAGG-TAGACGGGT 34552 || | ||| || ||| |||||||| | || | || || || || || ||| Sbjct 105109 TCCATGATTGGTTCGTCGCTGTCGTCGTTGAGATACAGGTACCGGGCCGGATACTTGGGC 105168 Query 34553 ATTCTCATCAGGACGCCCCATGAATTCGAGCATTCGCGCGATGGC-TTGATACTCATGCT 34611 | | || || || || | ||| ||||| ||| |||| |||| |||| |||| Sbjct 105169 TTGCCTGTC-GGCCGTCCTAGGAACGTCAGCATCTCCGCCGTGGCGTTGA-ACTCGTGCT 105226 Query 34612 GATTCGAGCGGGTTTCGTCCGCCTCTACTGCGCTCAAGCGCTTCGCAGCGACCCCCTCAA 34671 ||| |||||| || || || || || || |||||| || || || |||| Sbjct 105227 GATGCGAGCGCGTGGGATCGATTTCCACCGCCGCCAGGCGCTTGATCGCCACGCCTTCAA 105286 Query 34672 AGTACTCCGATAAATAACCAGGCTTCAT-----CCCCGAAGCTCCGTTGTTGATGCG-TC 34725 |||| || || | ||| || || |||| |||| | || | || | || || Sbjct 105287 AGTATTCGGACAGATACCCGCGCCTCATGTCATCCCCTGATGTCTGCGGTGACTCCGCTC 105346 Query 34726 GCTGTAAAGCCACTGTCCGAGGCCTGTCGCAACGCTCTCGATGTTCTTGTTTGCGCCACG 34785 | || |||||| | | | || | | | ||| | || || || || Sbjct 105347 G-TGCCAAGCCATTCTGCCAGCTCCGCGCCCACGTCCACGTGGT----GT--------CG 105393 Query 34786 CAAAGCGCACTCCCACACAATACCAACGCGCCACCCTTGGGTACGTAGGGCCGCTAGTGC 34845 || |||||||||||||| | | || ||||| || | | | || |||| | Sbjct 105394 CAGCGCGCACTCCCACACCACCGCGACCCGCCATCCCATGTTGAGCAGCTCCGCGCGGTG 105453 Query 34846 CTTATGATCATTGGCACGATTTCGATCAATTTTTTCACGCCAGAAATCCGTTCGCGTTCC 34905 ||| | || ||||| || || ||| | || || | ||||||| || | || ||| Sbjct 105454 CTTGTCGTCGTTGGCCCGGTTCCGACCGATCTTGGCCTGCCAGAACTCGGGCCGGGTTTT 105513 Query 34906 GGGCAACTTAAAGAGCGAGCAGTCATGTCCATGCCAGAAGCATCCGTGTACGAATATGAC 34965 ||| || || |||| ||| || || || |||||||| || ||||| ||||| | || Sbjct 105514 CGGCCACCGGAACAGCGGGCAATCGTGCCCGTGCCAGAAACAGCCGTGAACGAACACAAC 105573 Query 34966 CGCATGATAGCGCGGCAACACAATATCGGGCTTTCCCGGTAAATCCCGGACATGGAGACG 35025 | | |||| |||| ||| || ||||| | ||||| | ||| || |||| || || Sbjct 105574 GGAACGATATTTGGGCAGCACGATGTCGGGATGCCCCGGCAGATCACGCGCATGCAGCCG 105633 Query 35026 AAATCGAAAGCCCTGACGATGTAGCAGACTACGAATGAGAATTTCGGGTTTGGTATTACG 35085 | ||| |||| | || ||| || ||||| || ||| || | ||| || Sbjct 105634 GTACCGATAGCCGCGCGCGTGAAGCGCACGACGAACGATCCATTCCGGCTGGGTGTTCTT 105693 Query 35086 CCCCCGTATGCCGGACATCATTCGGCTACGGG-TGGCGCTGTCTACCACGTCAACCAT-- 35142 || ||||| ||||||||||| ||||| ||| | || | | || ||||| |||| Sbjct 105694 GCCGCGTATACCGGACATCATCCGGCTGCGGACTTCCGGCGGC-ACAACGTCCGCCATGC 105752 Query 35143 ---CAGGCG---------AAAAGCGGAAGTGTTG-ACGGAGTGCCGTCACGCTCCTCGGC 35189 |||||| | |||||| || || |||| | ||| | ||| |||| Sbjct 105753 GATCAGGCGGCGCTGGCCATCAGCGGA--TGCTGCACGGCG--CCGCCTTCCTCGACGGC 105808 Query 35190 AACGAGCGTCTGGA-TGTGTGGAGTCATAATTCTAGCGACCTCTTTCATCACTGGCATCA 35248 ||| || | | || | || | ||| || | || ||| | | |||||| |||| Sbjct 105809 CTTGAG-GTAGGCAATGCGGGGCGCCATGATCCGCGCCACCGCCTCCATCACAGGCACGC 105867 Query 35249 CGACGCTGTTACCAAATTGCCGGTACGCCTGCGTATCACTAACGGGGATTCGGTACGTAT 35308 |||||||| || || || || ||||||||||| || || ||| || | | |||| Sbjct 105868 AAACGCTGTTGCCGAACTGGCGATACGCCTGCGTGTCGCTCACGACAATCTCGAAGGTAT 105927 Query 35309 CCGGAAAGCCCATAAGCCGCGCACATTCGCGAGGCGTCAGGCGCCGCGGACGCTTACCTT 35368 | ||||| ||||| || || || |||||||| || |||| ||| ||||||||||| || | Sbjct 105928 CGGGAAACCCCATCAGACGTGCGCATTCGCGCGGGGTCAAGCGGCGCGGACGCTTGCCCT 105987 Query 35369 TTCCTTGGTAGACGAGAATTTCCGAGCCGTCCTTGTGGTATCGAGCCGACAGCGTACGCG 35428 | || | | | || ||||| |||||||||| ||| || || |||| || |||| Sbjct 105988 TGCCCCGATGAATCAGGATTTCGCTGCCGTCCTTGAAGTAGCGTGCGGACAAGGTGCGCG 106047 Query 35429 TTACGCTGTCC------GGATAGGCCATGCCAAATCCAAAGCCGTTACCCGCCGCGCGAT 35482 | | ||| || | | ||| || || ||||| ||||| || || || | | Sbjct 106048 TGTAGTGATCCACACCAGGCTTGACCAGTCCGAAACCAAAACCGTTGCCAGCGGCCTGGT 106107 Query 35483 GCTTCTCGGCATATGCTTGTAGGTACGTCCAGAGGTTCGGCGTCAGGGTGTACTTGGATT 35542 |||| | ||||| | || |||||| ||| || |||||||| |||||||| | Sbjct 106108 GCTTGGCCGCATAGTCCTGCAGGTACTGCCACAGTCGTGGCGTCAGCGTGTACTTCGGCG 106167 Query 35543 GGACCTTGCGCTTTTCG-TGATCAAAAAATCTCTCACCGTCCCACGGAAGAACTGGCTCG 35601 |||||| ||| | | | || | ||| || |||| | ||| Sbjct 106168 ACACCTTGGCCTTCGGGCCGGTGGTGAAGTGACTCTCC------------AACT-GTTCG 106214 Query 35602 CTGCCGTCAGTCTTG-TGCAAAATCGAAGCGA-GACGAGGCCCATCTGCCGGCAAGCGCA 35659 || || || | |||| || |||| | | | |||| | ||| || ||| Sbjct 106215 GAACCATC-CTCGGGATGCAGGATGCTGGCGATGTCCCGCCCCA-CATCCGCCAGTTGCA 106272 Query 35660 GATCGTCCCATGAGAAGCCGGTCTTCTTCCGGAATCCGACGATGACGATTCGCTCACGAT 35719 | |||||||| | ||| | || | || |||||||| ||||||| ||| || || || | Sbjct 106273 GGTCGTCCCACGTGAAATCCGTGTCCTCACGGAATCCCACGATGATGATGCGTTCGCGGT 106332 Query 35720 GCTGAGGGGTGAAGTGCTGGCCGTCGATGATCTTGTAATGGACGTCATACTGGAGCTCGT 35779 |||| ||| ||||||| ||||||| | |||||| || | || |||| || Sbjct 106333 GCTGCGGGACAAAGTGCTTTGCGTCGATCACGCGGTAATGCACCTTGTATCCCAGCTTGT 106392 Query 35780 CACGCAACGTTTGCAAGATAACGGCAAAAGTGTTGCCTTTATCGTGCGAC-AACAA-ATT 35837 || | | | ||| || || |||||||| || |||| ||| |||| || Sbjct 106393 TTTCCAGCACATCCTTGATGACCCGGAACGTGTTGCCCTTGTCGT--GACTTACAAGGTT 106450 Query 35838 CTTCACGTTTTCCAACACGAAGGCCGCAGGTCGCTTCGC-TGC--GATGATCCGGGCTAC 35894 |||||||| |||| || ||| ||| || ||||| || || |||| || | | Sbjct 106451 TTTCACGTTCTCCAGCAGGAACGCCTTGGGGCGCTTGGCACGCAGGATGTTC---TCGAT 106507 Query 35895 GTCGAAAAATAGAGTGCCCTGAGTAGTGCACTCGAAGCCGTGCGGGCGGCCCAGTGAGTT 35954 ||||| || || |||||||| || |||||||||||||| ||||| || ||||| | ||| Sbjct 106508 CTCGAAGAACAGCGTGCCCTGCGTGGTGCACTCGAAGCCATGCGGCCGTCCCAGCGCGTT 106567 Query 35955 CTTTTTGCTTACTCCCGCGATACTAAACGGCTGGCAAGGGAAGCCGGCAAGCAAGACGTC 36014 || ||||| || || || || |||||||||||| || || ||||| | || ||||| Sbjct 106568 TTTCTTGCTCACGCCGGCAATCGAAAACGGCTGGCACGGAAATCCGGCCAACAGCACGTC 106627 Query 36015 ATGAGTTGGCACACTTTCGGCCGCGAATGGGACGATGTCACCGATGAAAGGATGATGGTC 36074 |||| || | | |||| | | ||| || || || ||||| | ||| Sbjct 106628 ATGATCGGGGATGTCCTGCACCGCCACCTTGGTGATATCGCCCTCAAACGGATGGTCGTC 106687 Query 36075 GCCGAAGTTATCGACGTACGTCTTCTTCGAAAAGTCGTTCCACTCGCTAGTGAATACGCA 36134 ||||||||| | || ||||| ||||| | |||||||||||||| ||||| ||||| Sbjct 106688 GCCGAAGTTGTGCTGATAGGTCTTTTTCGACCAATCGTTCCACTCGCTGGTGAACACGCA 106747 Query 36135 TTCACCGCCATGAGCCTCAAAACCAAGGCGAATGCCACCGATTCCGGCGAACAGATCGAT 36194 ||||| | ||| || || | ||| ||||| ||||| ||||||||||| || || Sbjct 106748 CGTGCCGCCGGCACGCTCGAACCCCATGCGGATGCCGCCGATACCGGCGAACAGGTCAAT 106807 Query 36195 GAAA 36198 |||| Sbjct 106808 GAAA 106811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129035844140208