Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq24293 565 3e-156 seq1880 333 3e-86 seq27014 178 1e-39 seq32758 158 1e-33 seq5280 143 3e-29 seq32305 123 3e-23 seq28567 82.4 8e-11 >seq24293 Length=256785 Score = 565 bits (626), Expect = 3e-156 Identities = 722/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 206416 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 206357 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 ||||| || || | ||| | ||||| ||||| || || | |||||| | |||||||| Sbjct 206356 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGCTGCTCC 206298 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 206297 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 206238 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 || ||||| ||||| || |||| |||| || |||||| | ||||| || || || Sbjct 206237 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCACTTTTACCCAAT 206178 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 ||||||||| ||||| ||||||| ||| | || ||||| ||||||| || | |||| Sbjct 206177 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAATTAATAGT 206118 Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCG 162743 | |||||| | | || | | |||||||| ||||| |||||||| || ||| Sbjct 206117 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 206058 Query 162744 TCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGG 162802 ||| |||||||| || ||||| ||| || ||||| || || |||||||| || || | | Sbjct 206057 TCTGGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCCGCTGCTACCG 205999 Query 162803 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 162862 |||| ||| || | || || | |||||||| ||| ||||| | ||||| | || | Sbjct 205998 CAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 205939 Query 162863 TCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATC 162922 | |||||| ||||| | ||| |||| ||||| || ||||||||||| || ||||| | Sbjct 205938 TTTCTGGTACTTTCAATTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 205879 Query 162923 CCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACG 162982 | || |||||||| ||||| || ||||| ||||| || || || |||||||| ||||| | Sbjct 205878 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 205819 Query 162983 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 163042 |||| ||||| || ||| | || | || || || |||| ||| || || | | Sbjct 205818 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 205759 Query 163043 GTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCG 163102 |||||| ||||||||||| ||||| || || || ||||| || || |||||||| || | Sbjct 205758 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 205699 Query 163103 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 163162 | || ||||||||||||||||| ||||||||||| ||||| || ||||| ||||| | Sbjct 205698 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTTTTCCTAG 205639 Query 163163 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 163222 |||| |||||||| || || |||||||| || || | || | || ||||| |||| Sbjct 205638 CTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCA 205579 Query 163223 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 163282 |||| || |||||||| |||||||| || | ||||| | || || ||||| | || | Sbjct 205578 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGCGTGTAATTAATA 205519 Query 163283 CCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATG 163342 | ||||| || || | |||||||| | ||||||||||||||||| || || |||| Sbjct 205518 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 205459 Query 163343 CTCACAACTTCCCACTTGACCTGGCAGCT 163371 |||| |||||||| || || || || ||| Sbjct 205458 CTCATAACTTCCCTCTAGATCTAGCTGCT 205430 >seq1880 Length=405587 Score = 333 bits (368), Expect = 3e-86 Identities = 448/622 (72%), Gaps = 4/622 (1%) Strand=Plus/Minus Query 164019 TGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTG 164078 |||||| |||||||| || ||| ||| || || || || || || || || || |||| Sbjct 130705 TGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGGCAGTCTGGTTG 130646 Query 164079 GTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGG 164138 |||||| || || |||| | || ||||| || || ||||| | | || ||||||| Sbjct 130645 GTTCTTTGCACCTAGTTTTAGTGTAGCAGCTATATTTCGATTCATACTCTTTTTTCAAGG 130586 Query 164139 ATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGG 164198 ||||||||| ||||| ||||||| || ||||||||||||||||| ||| || | |||| Sbjct 130585 ATTTCATAATTGGACACTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGC 130526 Query 164199 AGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGA 164258 || ||| ||| |||||||| || | || || |||||||| || | ||||||||| || Sbjct 130525 TGCTTTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGA 130466 Query 164259 ACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 164318 ||||| || || || ||| | | || || | ||||| |||||||| ||||| Sbjct 130465 TGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGT 130406 Query 164319 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCT 164378 ||| || |||||||| ||||| || ||||| || ||||| ||||| || || || ||| | Sbjct 130405 CACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTT 130346 Query 164379 TCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTAT 164438 ||||| || ||||| ||||| || || | ||| |||||| || |||| | | Sbjct 130345 ACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 130286 Query 164439 TGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGA 164498 || | ||||| || || ||||| || || || || ||| || ||| | ||||| || Sbjct 130285 CGGTTTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCAGCGGA 130226 Query 164499 AGATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGC 164558 ||||||||| || ||||||||||| ||||| || || |||| |||||||| | ||||| Sbjct 130225 AGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGC 130166 Query 164559 ATGGTTAGCACCAGTTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTG 164616 ||| | || | || |||| || || ||| || | ||||| || || || || Sbjct 130165 TTGGATGGCGGCTCAAGATCAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTA 130108 Query 164617 CCGAGAGGTAATGCGCTTTAAT 164638 || | || || || ||||||| Sbjct 130107 CCACGTGGAAACGCTCTTTAAT 130086 >seq27014 Length=84001 Score = 178 bits (196), Expect = 1e-39 Identities = 259/360 (72%), Gaps = 6/360 (2%) Strand=Plus/Plus Query 162712 TACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGC-GT 162770 |||||||| ||||| |||||||| || |||||| |||||||| || ||||| ||| || Sbjct 19914 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGAT-TGCTGT 19972 Query 162771 AGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCA 162830 ||||| || | ||| |||| || || | ||||| ||| || | ||||| | ||||| Sbjct 19973 TGCATATTCAACTCCTATTGCCGCTGCTACCGCAGTTTTCTTGATTTATCCAATAGGTCA 20032 Query 162831 AGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGT 162890 || ||| ||||| | ||| | | || || ||||| ||||| | ||| |||| Sbjct 20033 AGCAAGTTTTTCTGATGATATGTCTCTAGGAATTTCTGGTA--TTCAATTTTATGATTGT 20090 Query 162891 CTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 162950 ||||| || ||||||||||| || ||||| || || |||||||| ||||| || ||||| Sbjct 20091 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 20150 Query 162951 CTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 163010 |||| || || || ||||||| ||||| ||||| ||||| | ||| | || | Sbjct 20151 -ATCGGCGGCTCCCT-ATCAGTGCTATGCATGGTTCCTTGGTAATTTCTAGTTTGATCAG 20208 Query 163011 TGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 163070 || || | |||| ||| || || | ||||||| || |||||||| ||||| || Sbjct 20209 GGAAACCAAAGAAAATGAATCTGCTAATGAAGGTTACAGATTAGGTCAAGAGGAAGAAAC 20268 >seq32758 Length=53022 Score = 158 bits (174), Expect = 1e-33 Identities = 185/246 (75%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 162712 TACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGC-GT 162770 |||||||| ||||| |||||||| || |||||| | |||||| || ||||| ||| || Sbjct 20943 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGAT-TGCTGT 20885 Query 162771 AGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCA 162830 ||||| || || |||||||| || || | ||||| ||| || | || || | ||||| Sbjct 20884 TGCATATTCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCA 20825 Query 162831 AGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGT 162890 ||| ||| ||||| | ||||| | || || |||||| ||||| | ||| | || Sbjct 20824 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT-GT 20766 Query 162891 CTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 162950 ||||| || ||||||||||| || ||||| || || |||||||| ||||| || ||||| Sbjct 20765 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 20706 Query 162951 CTTCGG 162956 ||||| Sbjct 20705 ATTCGG 20700 >seq5280 Length=204759 Score = 143 bits (158), Expect = 3e-29 Identities = 184/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 162925 TTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGT 162984 || |||||||| ||||| || ||||| ||||| || || || |||||| | ||||| ||| Sbjct 175408 TTTCACATGTTAGGTGTAGCTGGTGTGTTCGGCGGCTCCCTATTCAGTTCTATGCATGGT 175467 Query 162985 TCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGT 163044 || || || || ||| | | | || || || ||| ||| || | || | ||| Sbjct 175468 TCCTTTGTAACTTCTAGTTTGATTAGGGAAACCACATAAAATGAATCTGATAATGAAGGT 175527 Query 163045 TACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGT 163104 |||| ||| ||||||| ||||| || || || ||||| || || |||||||| || || Sbjct 175528 TACAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGA 175587 Query 163105 CGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCT 163164 || ||| ||||||||||||| |||||||||| |||| || | || ||| | | | Sbjct 175588 CGATTGTTCTTCCAATATGCTAGTTTCAACAACTTTCGTTAATTAAAATTTTTCTTAGAT 175647 Query 163165 GCATGGCCTGTTGT 163178 | ||||||||||| Sbjct 175648 TCTTGGCCTGTTGT 175661 Score = 129 bits (142), Expect = 7e-25 Identities = 217/310 (70%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 154374 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 154315 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 ||||| || || | ||| | ||||| | ||| || || | |||||| | |||||||| Sbjct 154314 ATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATTATTGCCTTCATTGCTGCTCC 154256 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || || || || || || ||| ||||||| || |||| || || | || || || || Sbjct 154255 TCCAGTAGATATTGATGGTATC-GTGAACCTGTTTCTGGATCTCTACTTTACGGAAAAAA 154197 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 || ||||| ||||| || |||| ||| || |||||| | ||||| || || || Sbjct 154196 TATTATCTCAGGTGCCATTATTCCTACTTATGCAGCTATTGGTTTGCACTTTTACCCAAT 154137 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 ||||||||| ||||| ||||||| ||| | || ||||| ||||||| || | |||| Sbjct 154136 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAAATAATAGT 154077 Query 162684 ATTCCACTTC 162693 | |||||| Sbjct 154076 TCTACACTTC 154067 >seq32305 Length=14517 Score = 123 bits (136), Expect = 3e-23 Identities = 174/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 162430 TGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGC 162488 ||||| || || ||||||| || || | ||| | ||||| ||||| || || | | Sbjct 12732 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTTC 12674 Query 162489 CTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACT 162548 |||| | | |||| | || || || || || || || |||||||| || |||| || || Sbjct 12673 CTTCATTGTTGCTTCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCT 12614 Query 162549 CATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCT 162608 | || || ||||| || ||||| ||||| || |||| |||| || |||||| | Sbjct 12613 ACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTT 12554 Query 162609 TCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCC 162668 ||||| ||||| ||||||||||| |||| ||||||| ||| | || |||| ||||| Sbjct 12553 GCACTTTTATCCAATCTGGGAAGCAACATCCGTTGATGAATGGTTATACAACGACGGTCC 12494 Query 162669 TT 162670 || Sbjct 12493 TT 12492 >seq28567 Length=163623 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 163171 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAAC 163230 ||||| || || || ||||| || || | || | || ||||| |||||||| || Sbjct 84167 CCTGTAGTGGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 84108 Query 163231 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 163290 |||||||| |||||||| || | ||||| | || || |||| | || | |||| Sbjct 84107 GGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGTGTGTAATTAATTCTTGGGAT 84048 Query 163291 GACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAAC 163350 || || ||| |||| || |||||||||||||| || || |||||||| ||| Sbjct 84047 GATATTT--AACTGTGCTAACCATGGCATGGAAGTTATGCATGAACGAAATGCTCATAAC 83990 Query 163351 TTCCCACTTGACCT 163364 ||||| || || || Sbjct 83989 TTCCCTCTAGATCT 83976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554783868910400