Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq21561 104 3e-17 >seq21561 Length=15626 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48342 ACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTT 48401 |||||| || ||| ||| || || || | ||||| ||||| | || | |||| Sbjct 4475 ACACCTTTTCTTTTGCCACCACCCTGGTCCACATATCGAGCAGTGTCATTGAAGACTCGA 4416 Query 48402 AACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCT 48461 | ||| |||||||| ||||||||| ||||||| || || |||||||||||| |||| Sbjct 4415 AGCATCGGGACAATCCCATTTGATGTACCATTTGTCCCACGTATATAACTTCCAGTAGCA 4356 Query 48462 CTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGT 48521 | || ||| | |||| ||| || || || || ||| ||| | |||||| Sbjct 4355 CGGATGTTATGCACAGAAACACCAATTCCTCCAGCAGATTTGCTTATAATTGCACACTCC 4296 Query 48522 TTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATA 48563 || || |||||||| || || || || ||||||||| ||||| Sbjct 4295 TTCAGAGTATCATATATGCCCTCAATGCTATCATCTTTCATA 4254 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || || || |||||| |||||||| || || |||| | | Sbjct 4057 GTCCCGGCATTGAAAAGGGTAGGTGAAGCATGAGTAAACCATCGCTGAGACAACAGATGA 3998 Query 48660 TATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAA 48718 ||||||| ||| | ||||||||||| | ||| || || || | || || | ||| || Sbjct 3997 TATGTTTTAATGGCTGAATCTATATCATCCTTG-TGAATCCCAACAGCAACCCTCATCAA 3939 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||| | ||||| || ||||||| || | || || ||||| || || |||| | Sbjct 3938 CATGTGCTGAGGCCTCTCAACAACCTTCCCTTGGATCTTTAAAAGGTAAGACCTTTCAAG 3879 Query 48779 TGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 ||||||||||||||||| | || |||||| | |||| || ||| Sbjct 3878 GGTTTTAAAACCAAAATAATCATAGTCAAAGTCTCTGTCATATATGATT 3830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559285945817280