Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq24293 491 1e-134 seq32758 161 3e-35 seq27014 138 3e-28 seq5280 131 5e-26 seq28567 111 5e-20 seq1151 109 2e-19 seq32305 96.9 1e-15 >seq24293 Length=256785 Score = 491 bits (544), Expect = 1e-134 Identities = 703/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 206416 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 206357 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| |||||||||| || || || Sbjct 206356 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 206298 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | ||||||||||| Sbjct 206297 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 206238 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || ||||| || | | || | ||| || || || | || |||||||| || Sbjct 206237 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCACTTTTACCCAAT 206178 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 ||||||||| | | | || || ||| ||||||| ||||| || ||| || | || | Sbjct 206177 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAATTAATAGT 206118 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | ||||||||| | || ||||| || || | |||||||||| || | | Sbjct 206117 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 206058 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| |||| ||||| |||||||||| |||| || | |||| ||| ||| Sbjct 206057 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCCGCTGCTACCGC 205998 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 ||| ||||| |||| || | || ||||| |||||| |||||| |||||||| || || Sbjct 205997 AGTTTTCTTGATTTACCCAATAGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 205938 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||||||||| || |||||| | |||||||| || || || || || || |||||||| Sbjct 205937 TTCTGGTACTTTCAATTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 205878 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 ||| || ||| ||||| ||||| || ||||| || | || ||| ||||||||| || Sbjct 205877 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 205818 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGG 26460 ||||| ||||| | || ||||| ||||| | | || ||| | || Sbjct 205817 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 205758 Query 26461 CTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 26520 || | || || ||||| ||||| || |||||||| || || || || || || ||||| Sbjct 205757 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 205698 Query 26521 GAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGC 26580 |||| || || || ||||| ||||| || ||| ||||| | || || || || || Sbjct 205697 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTTTTCCTAGC 205638 Query 26581 TACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAA 26640 | ||||||| || || || || ||| | || || | ||||| |||| ||||| || || Sbjct 205637 TGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAA 205578 Query 26641 CCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTA 26699 |||||||||||| || || ||||| |||||||| ||| | || || | |||| || Sbjct 205577 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGCGTG-TAATTAATA 205519 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759 | ||||||||| | | ||||| |||||||| || | ||||||||||| || ||||||| Sbjct 205518 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 205459 Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784 |||||||||| || || || |||| Sbjct 205458 CTCATAACTTCCCTCTAGATCTAGC 205434 >seq32758 Length=53022 Score = 161 bits (178), Expect = 3e-35 Identities = 216/299 (72%), Gaps = 1/299 (0%) Strand=Plus/Minus Query 26075 AATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCAGCATATGCA 26134 || ||||| || ||| || | || | | ||||||||| | || ||||| || Sbjct 20997 AACGGCGGTCCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 20938 Query 26135 GGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATAT 26194 || | |||||||||| || | | || | ||| |||| ||||| |||||||||| Sbjct 20937 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 20878 Query 26195 ACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGT 26254 |||| || | |||| ||| |||||| ||||| |||| || | || ||||| ||| Sbjct 20877 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 20818 Query 26255 TTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAA 26314 ||| |||||| |||||||| || || ||||||||||| || |||||| | |||||||| Sbjct 20817 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT-GTATTCCAG 20759 Query 26315 GCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGG 26373 || || || || || || ||||||||||| || ||| ||||| ||||| || ||||| Sbjct 20758 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 20700 >seq27014 Length=84001 Score = 138 bits (152), Expect = 3e-28 Identities = 188/259 (73%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 26142 AGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCAC 26201 |||||||||| || | | || || ||| |||| ||||| |||||||||| || | | Sbjct 19927 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAACTC 19986 Query 26202 CACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTG 26261 | | |||| ||| |||||| ||||| ||||||| | || |||| |||||| || Sbjct 19987 CTATTGCCGCTGCTACCGCAGTTTTCTTGATTTATCCAATAGGTCAAGCAAGTTTTTCTG 20046 Query 26262 ATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAAC 26321 ||| ||| |||| || || ||||||| || || |||||| | |||||||| || || | Sbjct 20047 ATGATATGTCTCTAGGAATTTCTGGTA--TTCAATTTTATGATTGTATTCCAGGCTGAGC 20104 Query 26322 ATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTC 26381 | || || || ||||||||||| || ||| ||||| ||||| | | |||| || | | Sbjct 20105 ACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTG-TATCGGCGGCTC-C 20162 Query 26382 TTTTCGCTGCTATGCACGG 26400 | || ||||||||| || Sbjct 20163 CTATCAGTGCTATGCATGG 20181 >seq5280 Length=204759 Score = 131 bits (144), Expect = 5e-26 Identities = 224/321 (70%), Gaps = 3/321 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 154374 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 154315 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| ||| ||||| |||||||||| || || || Sbjct 154314 ATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATTATTGCCTTCATTGCTGCTCC 154256 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | |||||||| || Sbjct 154255 TCCAGTAGATATTGATGGTAT-CGTGAACCTGTTTCTGGATCTCTACTTTACGGAAAAAA 154197 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || ||||| || | | || | | | || || || | || |||||||| || Sbjct 154196 TATTATCTCAGGTGCCATTATTCCTACTTATGCAGCTATTGGTTTGCACTTTTACCCAAT 154137 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 ||||||||| | | | || || ||| ||||||| ||||| || ||| || | || | Sbjct 154136 CTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAAATAATAGT 154077 Query 26101 CTTCCACTTCTTAATAGGAGT 26121 | ||||||||| | || || Sbjct 154076 TCTACACTTCTTACTTGGTGT 154056 >seq28567 Length=163623 Score = 111 bits (122), Expect = 5e-20 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 26588 CCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAAT 26647 || || || || || ||| | || || | ||||| |||| ||||| || ||||||||| Sbjct 84167 CCTGTAGTGGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 84108 Query 26648 GGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGC 26706 ||||| || || ||||| |||||||| ||| | || || | |||| | | |||| Sbjct 84107 GGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGTGTG-TAATTAATTCTTGGGA 84049 Query 26707 TGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAA 26766 ||| |||| ||| | ||||||| ||| | ||||||||||| || || ||||||||||| Sbjct 84048 TGA--TATTTAACTGTGCTAACCATGGCATGGAAGTTATGCATGAACGAAATGCTCATAA 83991 Query 26767 CTTTCCACTTGA 26778 ||| || || || Sbjct 83990 CTTCCCTCTAGA 83979 >seq1151 Length=20901 Score = 109 bits (120), Expect = 2e-19 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || || Sbjct 11230 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACTTTGGATGGTTTGGTGTTTTT 11289 Query 25862 ATGATACCCTGC-TTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCAC 25919 ||||| |||||| ||| | | | ||| | ||| ||||| |||||||||| || || | Sbjct 11290 ATGAT-CCCTGCCTTATTGACCGAAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTC 11347 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | || |||||||| ||||| || | ||| || ||||| || || || | |||||||||| Sbjct 11348 CTCCAGTAGATATTGATGGTATTCATGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 11407 Query 25980 ATATAATATCAGGAGC 25995 |||| || ||||| || Sbjct 11408 ATATTATCTCAGGTGC 11423 >seq32305 Length=14517 Score = 96.9 bits (106), Expect = 1e-15 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 25847 TGGTTCGGGGTGCTTATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGC 25905 ||||| || || | ||||| || |||| | | || ||| | ||| ||||| || | Sbjct 12732 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTTC 12674 Query 25906 CTTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTT 25965 |||||| | || | || |||||||| ||||| || ||||| || ||||| || || | Sbjct 12673 CTTCATTGTTGCTTCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCT 12614 Query 25966 AATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACT 26025 | | |||||||||||||| || ||||| || | | || | ||| || || || | Sbjct 12613 ACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTT 12554 Query 26026 ACATTTTTACCCGATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || ||||||||||| | | || || ||| ||||||| | ||| || Sbjct 12553 GCACTTTTATCCAATCTGGGAAGCAACATCCGTTGATGAATGGTTATACAACGACGGTCC 12494 Query 26086 ATATCAA 26092 ||| || Sbjct 12493 TTATGAA 12487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146026396957248