Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq24293 545 7e-151 seq32758 188 2e-43 seq27014 154 4e-33 seq5280 147 7e-31 seq32305 129 2e-25 seq28127 113 1e-20 seq1151 107 6e-19 seq28567 95.1 4e-15 seq16835 82.4 2e-11 >seq24293 Length=256785 Score = 545 bits (604), Expect = 7e-151 Identities = 713/987 (72%), Gaps = 0/987 (0%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| ||||| || || |||||||| || || ||||| ||||||||||||||||| || | Sbjct 205430 AGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 205489 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || |||||||||| ||| ||||||||||| | || | || | | |||||| || Sbjct 205490 GTTAGCACGGTTAATAATATCAGCCCAAGTATTAATTACACGCCCTTGGCTATCAACTAC 205549 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 ||| || ||||| || || || || || || |||||||||||| | || | ||| || Sbjct 205550 TGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 205609 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 || ||| || | || ||||||||||| ||||| || ||||| || || || Sbjct 205610 AAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAAAAGTGTAATGAACGAGAGTTGTT 205669 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || |||||||| || || || ||||| Sbjct 205670 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 205729 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 || ||||| ||||| |||||| | || || | || ||||||| | || ||||| Sbjct 205730 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 205789 Query 36329 ACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 36388 | || | ||||| || | || ||||||||| ||||| | || ||||| Sbjct 205790 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 205849 Query 36389 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAA 36448 ||| || || ||||| | ||| || || || ||||||||||| ||||| || ||||| || Sbjct 205850 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 205909 Query 36449 GACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCC 36508 |||| ||||||||||||||| || ||||| || ||||||||||||||||| ||||| || Sbjct 205910 TACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCC 205969 Query 36509 TTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGC 36568 ||| || | ||||| | ||||| || || || || |||||||| |||||||| || Sbjct 205970 TTGACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAATATGC 206029 Query 36569 TACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 36628 ||| ||||| || | |||||| || | ||||||||||||| | || |||| ||| Sbjct 206030 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 206089 Query 36629 AGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAA 36688 | | | ||||| | ||||| | || || | || ||| || || ||||| ||||| Sbjct 206090 ACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTTGTATAA 206149 Query 36689 CCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGA 36748 ||| || || | || ||| ||||||||||||||||| ||||| | ||| || || || Sbjct 206150 CCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCAGA 206209 Query 36749 TGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG 36808 | || | || || || ||||| || |||||||| || |||| | ||| || ||||| Sbjct 206210 AGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGG 206269 Query 36809 CTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGT 36868 |||||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | Sbjct 206270 TTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGA 206329 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 ||| || || | | ||||||||| | || |||||||| || | || || || || Sbjct 206330 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATT 206389 Query 36929 GTTTGTACTTGTAACCCAGTCACATAA 36955 | || || || | ||||| ||| || Sbjct 206390 TTCGGTGCTGGTTATCCAGTTACAGAA 206416 >seq32758 Length=53022 Score = 188 bits (208), Expect = 2e-43 Identities = 222/299 (74%), Gaps = 1/299 (0%) Strand=Plus/Plus Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 36443 |||||||| || || ||||| | ||| || || || ||||||||||| ||||| || ||| Sbjct 20700 CCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 20759 Query 36444 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 36503 || || ||| ||||||||||||||| || ||||| || ||||||||||||||||| ||| Sbjct 20760 TGGAATACAT-CATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 20818 Query 36504 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 36563 || ||||| || | ||||| | ||||| || || || || |||||||| |||||| Sbjct 20819 CTTCCTTGACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAA 20878 Query 36564 TAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 36623 || || ||| ||||| || | |||| | || | ||||||||||||| | || ||| Sbjct 20879 TATGCAACAGCAATCCAAGGTCGCATATCCAGACGGAAACTAAGTTCCCACTCACGACCC 20938 Query 36624 AAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 36682 | |||| | | ||||| | ||||| | || || | || ||| || || ||||| Sbjct 20939 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTT 20997 >seq27014 Length=84001 Score = 154 bits (170), Expect = 4e-33 Identities = 200/273 (73%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 36357 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 36416 || ||||||||| || || | || |||| ||| || || ||||| | ||| || || Sbjct 20181 CCATGCATAGCACTGA-TAGGGAGCCGCCGA-TACACCAGCTACACCTAACATGTGAAAT 20124 Query 36417 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 36476 || ||||||||||| ||||| || ||||| || |||| |||||||||||| | || ||| Sbjct 20123 GGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATAAAATTGAA--TACCAGAA 20066 Query 36477 ATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACA 36536 || || |||| |||| ||||||| ||||| |||| || | || || | ||||| || Sbjct 20065 ATTCCTAGAGACATATCATCAGAAAAACTTGCTTGACCTATTGGATAAATCAAGAAAACT 20006 Query 36537 GCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGT 36596 || || || |||| ||| | |||||| || ||| ||||| || | |||||| || Sbjct 20005 GCGGTAGCAGCGGCAATAGGAGTTGAATATGCAACAGCAATCCAAGGTCGCATACCCAGA 19946 Query 36597 CTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 36629 | ||||||||||||| | || |||| |||| Sbjct 19945 CGGAAACTAAGTTCCCACTCACGACCCATGTAA 19913 >seq5280 Length=204759 Score = 147 bits (162), Expect = 7e-31 Identities = 218/308 (71%), Gaps = 1/308 (0%) Strand=Plus/Plus Query 36648 AAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCA 36707 ||||| | || || | || ||| || || ||||| |||||||| || || | || ||| Sbjct 154068 AAGTGTAGAACTATTATTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCT 154127 Query 36708 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCA 36767 ||||||||||||||||| ||||| | ||| || || | | || | || || || Sbjct 154128 GCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCATAAGTAGGAATAATGGCACCT 154187 Query 36768 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATA 36827 ||||| || || ||||| || |||| | ||| || ||||| ||||| |||||||| ||| Sbjct 154188 GAGATAATATTTTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACG-ATACCATCAATA 154246 Query 36828 TCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCA 36887 || || ||||| ||||||| || ||||| | |||| | ||| || || | | | Sbjct 154247 TCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCGGTCAATAAGGTA 154306 Query 36888 GGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAG 36947 |||||||| | || |||||||| || | || || || || | || || || | |||| Sbjct 154307 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGTGCTGGTTATCCAG 154366 Query 36948 TCACATAA 36955 | ||| || Sbjct 154367 TTACAGAA 154374 >seq32305 Length=14517 Score = 129 bits (142), Expect = 2e-25 Identities = 176/246 (72%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 36665 TTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTA 36724 || ||| || || |||| |||||||| || || | || || |||||||||||||| || Sbjct 12487 TTCATAAGGACCGTCGTTGTATAACCATTCATCAACGGATGTTGCTTCCCAGATTGGATA 12546 Query 36725 GAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCC 36784 ||||| | ||| || || || | || | || || || ||||| || |||||||| Sbjct 12547 AAAGTGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCC 12606 Query 36785 ATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGC 36844 || |||| | ||| || ||||| |||||||||||||| ||||| || |||| ||| | Sbjct 12607 GTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGAAGCAAC 12666 Query 36845 AACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCC 36904 || || | ||| | |||| | | ||| || || | | ||||||||| | || || Sbjct 12667 AATGAAGGAAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACC 12726 Query 36905 AAACCA 36910 |||||| Sbjct 12727 AAACCA 12732 >seq28127 Length=41111 Score = 113 bits (124), Expect = 1e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 36471 CCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAG 36530 || ||||| || ||||||||||||||||| ||||| ||||| || | ||||| | ||| Sbjct 29703 CCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCTATTGGGTAAATCAAG 29644 Query 36531 AATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATA 36590 || || || || || |||||||| |||||||| || ||| ||||| || | |||| Sbjct 29643 AAAACTGCGGTAGCAGCGGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATA 29584 Query 36591 CCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAG 36650 | || | ||||||||||||| | || |||| |||| | | ||||| | ||| Sbjct 29583 TCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAG 29524 Query 36651 TGGAACACAATGAGTTGATATGGTCCTCCGTT 36682 || | || || | || ||| || || ||||| Sbjct 29523 TGTAGAACTATTAATTCATAAGGACCGCCGTT 29492 >seq1151 Length=20901 Score = 107 bits (118), Expect = 6e-19 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 36762 GCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCA 36821 || || ||||| || |||||||| || |||| | ||| || ||||| ||| |||||||| Sbjct 11423 GCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCATGAATACCA 11364 Query 36822 TCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAA 36881 || ||||| || ||||| ||||||| || ||||| | |||| | | | | || || Sbjct 11363 TCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTTCGGTCAAT 11304 Query 36882 AGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTA 36941 | ||||||||||| | || |||||||| || | || || || || | || || || Sbjct 11303 AAGGCAGGGATCATAAAAACACCAAACCATCCAAAGTAAAGACGATTTTCGGTGCTGGTT 11244 Query 36942 ACCCAGTCACATAA 36955 | ||||| ||| || Sbjct 11243 ATCCAGTTACAGAA 11230 >seq28567 Length=163623 Score = 95.1 bits (104), Expect = 4e-15 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 35974 CTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGG 36033 |||| || || |||||||| || || || || |||||||||||||||||||| || | Sbjct 83974 CTAGATCTAGAGGGAAGTTATGAGCATTTCGTTCATGCATAACTTCCATGCCATGGTTAG 84033 Query 36034 CACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACT 36093 ||| |||| ||| ||| |||||| | || | || | | |||||| ||||| | Sbjct 84034 CACAGTTA--AATATCATCCCAAGAATTAATTACACACCCTTGGCTATCAACTACTGATT 84091 Query 36094 GATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCC 36153 | ||||| || || || || || || |||||||||||| | || | ||| |||| || Sbjct 84092 GGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTAAACC 84151 Query 36154 ATAT 36157 | || Sbjct 84152 AAAT 84155 >seq16835 Length=343710 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 36489 ATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCT 36548 ||||||||||| ||||| | ||| || | ||||| | ||||| || || || || Sbjct 191685 ATACCATCAGAAAAACTTCTTTGACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCG 191744 Query 36549 GCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGT 36608 |||||||| |||||||| || ||| ||||| || | |||||| || | |||||||| Sbjct 191745 GCAACAGGAGCTGAATATGCAACAACAATCCAAGGTCGCATACCCAGACGGAAACTAAGT 191804 Query 36609 TCCCATTGTCGTCCCAAGTA 36628 | ||| | || |||| ||| Sbjct 191805 TTCCACTCACGACCCATGTA 191824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149736611396208