Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq24293 538 1e-148 seq32758 179 1e-40 seq5280 150 5e-32 seq27014 149 2e-31 seq32305 132 1e-26 seq1151 111 5e-20 seq28127 102 2e-17 seq28567 95.1 4e-15 >seq24293 Length=256785 Score = 538 bits (596), Expect = 1e-148 Identities = 709/983 (72%), Gaps = 0/983 (0%) Strand=Plus/Plus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| || ||||||||||| || || ||||| ||||||||||||||||| || | || Sbjct 205434 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 205493 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||||| ||| ||||||||||| | || | || | | |||||| ||||| Sbjct 205494 GCACGGTTAATAATATCAGCCCAAGTATTAATTACACGCCCTTGGCTATCAACTACTGAT 205553 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || |||||||||||| | || | ||| |||| | Sbjct 205554 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTAAAC 205613 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||| ||||| || ||||| ||| || || || Sbjct 205614 CAGATACCCACTACAGGCCAAGCAGCTAGGAAAAAGTGTAATGAACGAGAGTTGTTGAAA 205673 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || || || ||||| || Sbjct 205674 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 205733 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| |||||| | || || | || ||||||| | || ||||| | Sbjct 205734 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 205793 Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872 || | ||||| || | || ||||||||| ||||| | || |||||||| Sbjct 205794 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 205853 Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 25932 || || ||||| | ||| || || || ||||||||||| ||||| || ||||| || ||| Sbjct 205854 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 205913 Query 25933 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 25992 | ||||||||||||||| || ||||| || ||||||||||||||||| ||||| ||||| Sbjct 205914 ATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 205973 Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052 || | ||||| | ||||| || || || || |||||||| |||||||| || ||| Sbjct 205974 CCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAATATGCAACA 206033 Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112 ||||| || | ||| || || | ||||||||||||| | || |||| |||| Sbjct 206034 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 206093 Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172 | | || | | ||||| | || || | || ||| || || ||||| || ||||| Sbjct 206094 GCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTTGTATAACCAT 206153 Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232 || || | || ||| ||||||||||||||||| ||||| | ||| || || ||| | Sbjct 206154 TCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCAGAAGTA 206213 Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292 || | || || |||||||| || |||||||| || |||| | ||| || ||||| ||| Sbjct 206214 GGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCA 206273 Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352 ||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | | Sbjct 206274 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTT 206333 Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412 || || || | | ||||||||| | || |||||||| || | || || || || | Sbjct 206334 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCG 206393 Query 26413 GTACTTGTAACCCAGTCACATAA 26435 || || || | ||||| ||| || Sbjct 206394 GTGCTGGTTATCCAGTTACAGAA 206416 >seq32758 Length=53022 Score = 179 bits (198), Expect = 1e-40 Identities = 188/246 (76%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 25923 |||||||| || || ||||| | ||| || || || ||||||||||| ||||| || ||| Sbjct 20700 CCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 20759 Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983 || || ||| ||||||||||||||| || ||||| || ||||||||||||||||| ||| Sbjct 20760 TGGAATACAT-CATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 20818 Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043 || ||||| || | ||||| | ||||| || || || || |||||||| |||||| Sbjct 20819 CTTCCTTGACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAA 20878 Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103 || || ||| ||||| || | ||| | || | ||||||||||||| | || ||| Sbjct 20879 TATGCAACAGCAATCCAAGGTCGCATATCCAGACGGAAACTAAGTTCCCACTCACGACCC 20938 Query 26104 AAGTAA 26109 | |||| Sbjct 20939 ATGTAA 20944 >seq5280 Length=204759 Score = 150 bits (166), Expect = 5e-32 Identities = 219/308 (71%), Gaps = 1/308 (0%) Strand=Plus/Plus Query 26128 AAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCA 26187 ||||| | || || | || ||| || || ||||| || ||||| || || | || ||| Sbjct 154068 AAGTGTAGAACTATTATTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCT 154127 Query 26188 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 26247 ||||||||||||||||| ||||| | ||| || || | | | || | || || ||| Sbjct 154128 GCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCATAAGTAGGAATAATGGCACCT 154187 Query 26248 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATA 26307 ||||| || || ||||| || |||| | ||| || ||||| ||||| |||||||| ||| Sbjct 154188 GAGATAATATTTTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACG-ATACCATCAATA 154246 Query 26308 TCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCA 26367 || || ||||| ||||||| || ||||| | |||| | ||| || || | | | Sbjct 154247 TCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCGGTCAATAAGGTA 154306 Query 26368 GGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAG 26427 |||||||| | || |||||||| || | || || || || | || || || | |||| Sbjct 154307 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGTGCTGGTTATCCAG 154366 Query 26428 TCACATAA 26435 | ||| || Sbjct 154367 TTACAGAA 154374 >seq27014 Length=84001 Score = 149 bits (164), Expect = 2e-31 Identities = 199/273 (73%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 25896 || ||||||||| || || | || |||| ||| || || ||||| | ||| || || Sbjct 20181 CCATGCATAGCACTGA-TAGGGAGCCGCCGA-TACACCAGCTACACCTAACATGTGAAAT 20124 Query 25897 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 25956 || ||||||||||| ||||| || ||||| || |||| |||||||||||| | || ||| Sbjct 20123 GGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATAAAATTGAA--TACCAGAA 20066 Query 25957 ATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACA 26016 || || |||| |||| ||||||| ||||| |||| || | || || | ||||| || Sbjct 20065 ATTCCTAGAGACATATCATCAGAAAAACTTGCTTGACCTATTGGATAAATCAAGAAAACT 20006 Query 26017 GCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGT 26076 || || || |||| ||| | |||||| || ||| ||||| || | ||| || || Sbjct 20005 GCGGTAGCAGCGGCAATAGGAGTTGAATATGCAACAGCAATCCAAGGTCGCATACCCAGA 19946 Query 26077 CTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109 | ||||||||||||| | || |||| |||| Sbjct 19945 CGGAAACTAAGTTCCCACTCACGACCCATGTAA 19913 >seq32305 Length=14517 Score = 132 bits (146), Expect = 1e-26 Identities = 177/246 (72%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 26145 TTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTA 26204 || ||| || || |||| || ||||| || || | || || |||||||||||||| || Sbjct 12487 TTCATAAGGACCGTCGTTGTATAACCATTCATCAACGGATGTTGCTTCCCAGATTGGATA 12546 Query 26205 GAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCC 26264 ||||| | ||| || || ||| | || | || || |||||||| || |||||||| Sbjct 12547 AAAGTGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCC 12606 Query 26265 ATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGC 26324 || |||| | ||| || ||||| |||||||||||||| ||||| || |||| ||| | Sbjct 12607 GTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGAAGCAAC 12666 Query 26325 AACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCC 26384 || || | ||| | |||| | | ||| || || | | ||||||||| | || || Sbjct 12667 AATGAAGGAAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACC 12726 Query 26385 AAACCA 26390 |||||| Sbjct 12727 AAACCA 12732 >seq1151 Length=20901 Score = 111 bits (122), Expect = 5e-20 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 26242 GCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCA 26301 || |||||||| || |||||||| || |||| | ||| || ||||| ||| |||||||| Sbjct 11423 GCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCATGAATACCA 11364 Query 26302 TCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAA 26361 || ||||| || ||||| ||||||| || ||||| | |||| | | | | || || Sbjct 11363 TCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTTCGGTCAAT 11304 Query 26362 AGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTA 26421 | ||||||||||| | || |||||||| || | || || || || | || || || Sbjct 11303 AAGGCAGGGATCATAAAAACACCAAACCATCCAAAGTAAAGACGATTTTCGGTGCTGGTT 11244 Query 26422 ACCCAGTCACATAA 26435 | ||||| ||| || Sbjct 11243 ATCCAGTTACAGAA 11230 >seq28127 Length=41111 Score = 102 bits (112), Expect = 2e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 25951 CCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAG 26010 || ||||| || ||||||||||||||||| ||||| ||||| || | ||||| | ||| Sbjct 29703 CCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCTATTGGGTAAATCAAG 29644 Query 26011 AATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATG 26070 || || || || || |||||||| |||||||| || ||| ||||| || | ||| Sbjct 29643 AAAACTGCGGTAGCAGCGGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATA 29584 Query 26071 CCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109 | || | ||||||||||||| | || |||| |||| Sbjct 29583 TCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 29545 >seq28567 Length=163623 Score = 95.1 bits (104), Expect = 4e-15 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 25459 TCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACGG 25518 || ||||||||||| || || || || |||||||||||||||||||| || |||| | Sbjct 83979 TCTAGAGGGAAGTTATGAGCATTTCGTTCATGCATAACTTCCATGCCATGGTTAGCACAG 84038 Query 25519 TTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACTGATTG 25578 ||| ||| ||| |||||| | || | || | | |||||| ||||| || ||| Sbjct 84039 TTA--AATATCATCCCAAGAATTAATTACACACCCTTGGCTATCAACTACTGATTGGTTG 84096 Query 25579 AAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATAT 25637 || || || || || || || |||||||||||| | || | ||| |||| ||| || Sbjct 84097 AAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTAAACCAAAT 84155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151268468173152