Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq347750 188 2e-43 seq33802 188 2e-43 seq292919 134 4e-27 seq35003 134 4e-27 seq33774 96.9 1e-15 >seq347750 Length=267 Score = 188 bits (208), Expect = 2e-43 Identities = 164/203 (81%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 3626 GGCAGCAACTCCTCCCCGAC---CTGGCGGGCATGCTCGATGGAGCTGGCCTTGATGCGC 3682 || ||||||||||||||||| |||||||||||||| || | || || | ||||||| Sbjct 203 GGTAGCAACTCCTCCCCGACGACCTGGCGGGCATGCTTGAGGCTGCCGGTCCGGATGCGC 144 Query 3683 GTCCAGCCCTTGCCCCAGTCCTGGCTCAGGCCGCCCTGGTCCCGGAAGAACGGACCGTGC 3742 ||||| |||||||||||||| |||| ||||||||| | ||||||||| |||||| Sbjct 143 TTCCAGTTCTTGCCCCAGTCCTCCGTCAGTCCGCCCTGGCTCACGAAGAACGGGCCGTGC 84 Query 3743 TTCACGAAGACCTTGTTGCCGGCGTTGCGGTGCACGAAGTAGGTGTCATCGTCGATCGGG 3802 |||||||| || | |||||||||||| ||||||||||||| ||||||||||| Sbjct 83 TTCACGAACACGGCGCCGCCGGCGTTGCGCATGACGAAGTAGGTGTTGTCGTCGATCGGC 24 Query 3803 TCGTCTGCGCGGTCATGCTCGAT 3825 ||||| |||||||| |||||||| Sbjct 23 TCGTCCGCGCGGTCGTGCTCGAT 1 >seq33802 Length=298597 Score = 188 bits (208), Expect = 2e-43 Identities = 244/328 (74%), Gaps = 13/328 (4%) Strand=Plus/Minus Query 21195 TGAGCCTGCTGGTGGTGGACTACCTGCAGCTGCTGGAGAGCTCCGG---CAAGTCCACTC 21251 || ||||| | ||| | ||||||||||||||| || || |||| |||| | | Sbjct 56572 TGGGCCTGATCGTGATCGACTACCTGCAGCTGATGCAGGTGCCCGGGAACAAGGAGAACC 56513 Query 21252 GC---ACCGAGGACGTCAGCGACATGTCCCGC-CAGTGCAAGCTGCTGGCGATGGAGCTT 21307 || |||||| | |||| | || || || || || ||| ||| || | ||| || Sbjct 56512 GCGCCACCGAG-ATTTCAG--AAATCTCGCGTTCACTG-AAGGGGCTCGCCAAGGAACTG 56457 Query 21308 GGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCG-GCCGAACAA 21366 | |||||||||| || |||||| | |||||||| ||||| ||||| ||||| ||| Sbjct 56456 AACGTGCCCGTGATCGCCCTCTCGCAGTTGAACCGCTCGCTGGAACAGCGCGCCGA-CAA 56398 Query 21367 GCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGAT 21426 ||| ||||||||||| |||||||||||||| || || ||||||||||||||||| ||||| Sbjct 56397 GCGCCCGATGATGTCCGACCTGCGCGAGTCGGGCGCCATCGAGCAGGACGCCGACGTGAT 56338 Query 21427 CATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGA 21486 ||||||| | |||||||||||| |||| || ||| | | || ||| |||| || Sbjct 56337 CATGTTCATCTACCGCGACGAGTACTACAACAAGGAATCGGCGGACAAGGGCCTGGCCGA 56278 Query 21487 GTTGATCATCGCGAAGCACCGCAACGGC 21514 | | ||||||| ||||| ||||||||| Sbjct 56277 GATCATCATCGGCAAGCAGCGCAACGGC 56250 >seq292919 Length=357 Score = 134 bits (148), Expect = 4e-27 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 3595 TGGGGCCTGCGAGGTAGATGCGCTGGGTCACGGCAGCAACTCCTCCCCGACCTGGCGGGC 3654 ||| | | |||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 41 TGGAGACAGCGAGGTAGATGCGCTGGCTCACGGCAGCAACTCCTCCCCACCCTGGCGGGC 100 Query 3655 ATGCTCGATGGAGCTGGCCTTGATGCGCGTCCAGCCCTTGCCCCAGTCCTGGCTCAGGCC 3714 ||||| || | || |||| |||||||| ||||| ||| |||||||||| ||||||| Sbjct 101 ATGCTTGAGGCTGCCGGCCCTGATGCGCTTCCAGTTCTTCCCCCAGTCCTCTGTCAGGCC 160 Query 3715 GC 3716 || Sbjct 161 GC 162 >seq35003 Length=5273 Score = 134 bits (148), Expect = 4e-27 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 3595 TGGGGCCTGCGAGGTAGATGCGCTGGGTCACGGCAGCAACTCCTCCCCGACCTGGCGGGC 3654 ||| | | |||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 2209 TGGAGACAGCGAGGTAGATGCGCTGGCTCACGGCAGCAACTCCTCCCCACCCTGGCGGGC 2268 Query 3655 ATGCTCGATGGAGCTGGCCTTGATGCGCGTCCAGCCCTTGCCCCAGTCCTGGCTCAGGCC 3714 ||||| || | || |||| |||||||| ||||| ||| |||||||||| ||||||| Sbjct 2269 ATGCTTGAGGCTGCCGGCCCTGATGCGCTTCCAGTTCTTCCCCCAGTCCTCTGTCAGGCC 2328 Query 3715 GC 3716 || Sbjct 2329 GC 2330 Score = 84.2 bits (92), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 4/72 (6%) Strand=Plus/Plus Query 7493 ATGGTTGAATCGCCCACAGGGCGGCGTCCGGTGCGTGCT----GGAAGAGAAAGCGCCCC 7548 || ||| || |||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 4910 ATAGTTTGATTGCCCACAGGGCGGCGTCCGGTGCGTGCTTGCTGGAATTGAAAGCGCCCC 4969 Query 7549 AGGTGGGGCGCT 7560 |||||||||||| Sbjct 4970 AGGTGGGGCGCT 4981 >seq33774 Length=113159 Score = 96.9 bits (106), Expect = 1e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 13621 GCTGGTAGATCTCGGAGCGGTGGATGGCGACGTCGTCCGGGGCGGTGATGCCGAGGCGCA 13680 ||||||||||||| ||| || | |||||| | | ||| ||| ||||||||| ||| | Sbjct 112924 GCTGGTAGATCTCTTCGCGATGCACGGCGACATTCTTCGGCGCGTTGATGCCGATGCGTA 112865 Query 13681 CCTGGTCGCCTTGGCTGCTGAGGACCGTGACGGTGATGTTGTCGCCGATATGCAGGGTTT 13740 |||| | ||||| || || || |||||||| | | ||||||||| |||||||| Sbjct 112864 CCTGATTGCCTTTCACGCCCAGAACGGTGACGGTCACCTCGTCGCCGATCATCAGGGTTT 112805 Query 13741 CGCCGGGGCGGCGGGTCAAGATCAGCATGGT 13771 |||| | |||||||| |||| |||||| Sbjct 112804 CGCCAACCCTGCGGGTCAGAATCAACATGGT 112774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156360856918128