Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq33802 167 4e-36 >seq33802 Length=298597 Score = 167 bits (184), Expect = 4e-36 Identities = 266/380 (70%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 22978 TCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGG 23037 || || ||||| |||||||| || || || |||||| ||||||||| ||||| Sbjct 233881 TCGTCGGATTCGAAGAACAGCATCTGCGCCACGCCTTCGTTGGCGTAGATCTTCGCCGGC 233940 Query 23038 CTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGC 23097 || ||||| ||||| || ||||| || | ||||| |||||| || |||||||| Sbjct 233941 AGCGGCGTGGTGTTGGAGAATTCCAGCGTCACGTGGCCTTCCCATTCCGGCTCCAGCGGG 234000 Query 23098 GTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAAT 23157 |||||||| |||||||||||||| |||||||| || ||||| ||||| | || | Sbjct 234001 GTGACGTTGACGATGATGCCGCAGCGCGCATAGGTGCTCTTGCCCAGGCACACCACCAGC 234060 Query 23158 ACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGA 23217 ||||| ||||||||| ||| | ||| |||| ||||| ||||| ||| ||||| Sbjct 234061 ACGTCGCGCGGAATGCGGAAATACTCCACCGTGCGCGCCAGCGCGAAGGAGTTGGGCGGG 234120 Query 23218 ATGATCAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAAATTGTCTTCGGTGAAATTC 23277 ||||| | | | ||| |||| | ||||| |||| | ||| | Sbjct 234121 ATGAT--GCACACGTCCG-ACACCACGTCC------ACGAAGCTGTCCGGGTCGAACGCC 234171 Query 23278 TTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGA 23337 || || ||||||| | | || | ||||||||| |||||||| ||| ||||||| Sbjct 234172 TTCGGGTCGACAATGGTGGAGTTGATGTTGGTGAACACCTTGAACTCGCGCGCGCAACGC 234231 Query 23338 ATATCGTAGCCGTAGCTGGA 23357 | ||||||||||||||||| Sbjct 234232 ACGTCGTAGCCGTAGCTGGA 234251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893085974700160