Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq78578 145 2e-30 seq33768 136 1e-27 >seq78578 Length=1014 Score = 145 bits (160), Expect = 2e-30 Identities = 215/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 25971 GTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCCCACTTGCGGGTTTT 26030 || ||| || || || ||||||||||| | || ||||| |||||||||| |||||| Sbjct 241 GTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTCCCACTCGCGGGTGCG 300 Query 26031 CAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGC 26090 || || || | ||| ||| ||||| ||| ||||| |||||||| || || Sbjct 301 GAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATACTCACCCGCGATTTCGGC 360 Query 26091 TACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTG 26150 | |||||| || | ||| ||||| ||||| || || || | || | ||||||||| Sbjct 361 GATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCCTGCTGCTGGCCGGTCTG 420 Query 26151 CTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGG 26210 |||||| ||||||||||| ||| || | ||| ||||| | || ||| ||| || || Sbjct 421 CTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTTACGGCGTTGCCGTTCGG 480 Query 26211 CATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCC 26270 |||| |||| || || ||| || ||| ||||| || || ||||| || ||||| Sbjct 481 GGTGTAGCGGACTTCCGGGTCGCCGCCGGCGTTGCCGACGAGAATCACTTTGTTGACGCC 540 Query 26271 GCGTG 26275 |||| Sbjct 541 TCGTG 545 >seq33768 Length=156001 Score = 136 bits (150), Expect = 1e-27 Identities = 254/368 (69%), Gaps = 20/368 (5%) Strand=Plus/Minus Query 25915 CCGCCGCC---GCTGCCGCCTTCTGGAGCCTTGCCGATCATCTGCATGGTTCCGCCAACG 25971 |||||||| || ||||||||| | ||| ||| | ||||||||| || Sbjct 53475 CCGCCGCCCGAGCCGCCGCCTTC-GCCGCC--GCCCAGCATCTGCATCT---------CG 53428 Query 25972 TTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCCC---ACTTGCGGGTT 26028 ||| | | || || |||| ||||||||| | ||||||||| || ||||| ||| Sbjct 53427 TTGGCGATGATGTCGGTGGAGTAGCGCTCGATGCCGTCCTTGTCGGTGTACTTGTCGGTG 53368 Query 26029 TTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCC 26088 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 53367 CGCAGCGAACCCTCGATGTAGACCTGCCGGCCTTTCTTCAGGTACTCGCCGGCGATCTCG 53308 Query 26089 GCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGT-CACTTCTTTCTTTTCGCCGGT 26147 || | |||||| |||||| ||||| |||||||| || | || || | |||||| | Sbjct 53307 GCCAGCTTGCCGAACAGCTTCACGCGGTGCCATTCGGTGCGCTCCTGGC-GCTCGCCGCT 53249 Query 26148 CTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATT 26207 |||||| ||| |||| ||| || || || | | | | ||| || ||| ||| | Sbjct 53248 CTGCTTGTCGGTCCACTGTTCCGAAGTGGCGATGCGCAGGCTGGTGATGGCGGTGCCGCT 53189 Query 26208 AGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTAC 26267 |||| ||| | || |||||| || ||||| ||||| | ||| || || || | Sbjct 53188 GCCGGTGTAGCGGGTTTCCGGATCGGCGCCTAGGTTGCCGACGATGATGACCTTGTTGAT 53129 Query 26268 GCCGCGTG 26275 |||||||| Sbjct 53128 GCCGCGTG 53121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159055141394832