Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq33768 187 1e-42 seq78578 156 2e-33 seq33802 86.0 2e-12 >seq33768 Length=156001 Score = 187 bits (206), Expect = 1e-42 Identities = 243/333 (73%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 9963 CATGGCATCCG---TCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 10019 ||||||| || ||||||| |||||| |||||||||| || |||||||| |||||||| Sbjct 53116 CATGGCACGCGGCATCAACAAGGTCATCATCGTCGGCAACCTAGGCGCCGATCCGGAAAC 53175 Query 10020 CCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTA 10079 ||||||| | |||||| ||| ||| ||| | | ||| |||| || | || | | Sbjct 53176 CCGCTACACCGGCAGCGGCACCGCCATCACCAGCCTGCGCATCGCCACTTCGGAACAGTG 53235 Query 10080 CAAGGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTT 10139 | |||||| |||||||||| |||| ||||||||||||||||| | | || Sbjct 53236 GACCGACAAGCAGAGCGGCGAGCGCCAGGAGCGCACCGAATGGCACCGCGTGAAGCTGTT 53295 Query 10140 CGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGA 10199 |||| || |||||||||| || |||||||||| || ||| || |||||||||||| Sbjct 53296 CGGCAAGCTGGCCGAGATCGCCGGCGAGTACCTGAAGAAAGGCCGGCAGGTCTACATCGA 53355 Query 10200 GGG-CCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCG 10258 ||| ||| | ||||| |||| || || | |||| || |||||| | |||| Sbjct 53356 GGGTTCGC-TGCGCACCGACAAGTACACCGACAAGGACGGCATCGAGCGCTACTCCACCG 53414 Query 10259 AGATCGTCGCCGAGAAGATGCAGATGCTCGGCG 10291 | ||| ||||| | ||||||||||||| |||| Sbjct 53415 ACATCATCGCCAACGAGATGCAGATGCTGGGCG 53447 >seq78578 Length=1014 Score = 156 bits (172), Expect = 2e-33 Identities = 217/301 (72%), Gaps = 5/301 (2%) Strand=Plus/Minus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 |||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 538 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 479 Query 10032 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGC 10091 || |||| |||| | | ||||| ||| || || | ||| ||| || || ||| Sbjct 478 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 419 Query 10092 GAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGC 10151 || |||| || | |||| ||||| ||||||||||| ||||||||| |||| Sbjct 418 GACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGC 359 Query 10152 CGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGT-CTACATCGAGGGCCGCATCC 10210 ||| |||| | ||||| ||||| || || | ||| || |||| |||| ||| ||| Sbjct 358 CGAAATCGCGGGTGAGTATCTGCGAAAAGG-GAGCCAGTGCTACGTCGAAGGCACTCTCC 300 Query 10211 GCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGTCGCCG 10270 |||| || |||| ||| || | ||| | | |||||||| ||||||||||||| || Sbjct 299 GCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCGTCG 243 Query 10271 A 10271 | Sbjct 242 A 242 >seq33802 Length=298597 Score = 86.0 bits (94), Expect = 2e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 8261 TGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGT 8320 ||||| |||||||||||||| |||| | | || | |||||| | | |||||| ||||| Sbjct 4124 TGGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGTGTAAGCGT 4183 Query 8321 ATCGTGAGTTCGAATCTCACCGCCTCCGCCAG 8352 | |||| ||||||||| |||| ||||||||| Sbjct 4184 ACCGTGGGTTCGAATCCCACCCTCTCCGCCAG 4215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196845188204016