Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq33810 86.0 1e-11 seq33767 86.0 1e-11 >seq33810 Length=274286 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 71166 TCGAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCC 71225 ||||||||| || ||| | ||||||||| |||||| || || || ||| |||||||| Sbjct 273553 TCGAGATCGCACCGCTCGCATACATGCGCGGCCGCACCCTCAACGACTCCTACGTGATCC 273494 Query 71226 TCGACGAGGCTCAGAACGCGTCGTTCGACGACCTGGAACTGTTCGTGACCCGTACCGGTC 71285 |||||||||| |||||| | | |||| | || | ||||| | ||||| | ||| Sbjct 273493 TCGACGAGGCGCAGAACACCACCGTCGAGCAGATGAAGATGTTCCTCACCCGCATCGGCT 273434 Query 71286 AGGGTTCGCAAGTCGTGATCTGCGGCGATCCCGGCCAGATCGACATCCCG 71335 || ||| | |||||| |||||| | ||||| ||||| | ||| Sbjct 273433 TCGGCTCGGTGGCGGTGATCACCGGCGACGTCAGCCAGGTCGACCTGCCG 273384 >seq33767 Length=185007 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||| Sbjct 111044 TGATGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTC 111103 Query 133019 AAATCCCTCCCCCGC 133033 ||||| ||||||| Sbjct 111104 GAATCCTGCCCCCGC 111118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 891267950715840