Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq29890 154 3e-32 seq938 152 9e-32 >seq29890 Length=111316 Score = 154 bits (170), Expect = 3e-32 Identities = 387/572 (68%), Gaps = 17/572 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||||| || || ||| |||||| || || ||| | ||| || Sbjct 72977 ATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACGGCTGAGGAGGTCGATTTG 72918 Query 25537 GCCAAGGA-CATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTA 25595 || |||| | ||| |||| ||||||| | |||||| ||||||| |||| | Sbjct 72917 TCCCAGGATCTCCGAC-ACTGGGACGCTCTTACTGCTGACGAGAAGCATTTCATCAAACA 72859 Query 25596 CGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG-AGAT 25654 |||| | || ||||| || || || || || || || ||||| || |||| | ||| Sbjct 72858 CGTGCTCGCCTTCTTCGCCGCATCCGACGGCATCGTATTGGAGAACCT-TGCGGGCCGAT 72800 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 ||| | ||| || ||| | |||||| | |||||||| || ||||| ||||| | Sbjct 72799 TCATGAAGGAGGTCCAGGTCTCGGAGGCTCGGGCCTTCTACGGCTTTCAGATCGCCATAG 72740 Query 25715 AAAATGTGCACTCTGAGGTGTA-TGCCAAGCTT-CTGATGACGTACATTACAGACGTCGC 25772 | || | ||||| ||| |||| ||| ||| || || ||||| | ||| ||| Sbjct 72739 AGAACATCCACTCCGAGATGTACAGCC--TCTTGCTCGAAACTTACATCAAAGATTCCGC 72682 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 |||| | | ||| || || ||||| ||| ||| ||||| ||| |||||| Sbjct 72681 GGAGAAGAACCTGCTCTTCCACGCGATCGAAACCATCCCCTGCATCGAGACGAAGGCCAA 72622 Query 25833 GTGGGCCATGAAGTGGATC-AACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 ||||||| | |||||| | | | ||| |||||| ||||| | || |||| Sbjct 72621 GTGGGCCCTCCGCTGGATCGAGGGGTCGGAG----TCGTTTGCGGAGCGAATAGTGGCCT 72566 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 | ||| ||| || || || || || ||| | | ||| |||| ||||||||||| Sbjct 72565 TCGCTTGTGTCGAAGGTATATTCTTTTCCGGAAGCTTCTGC-TCCATATTCTGGCTCAAA 72507 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGG 26009 || ||| ||||| || ||| ||||| || |||||| | ||| ||| ||||| || Sbjct 72506 AAGCGAGGGCTAATGCCGGGACTG-ACTTTCTCGAACGAGTTAATCTCCAGAGACGAAGG 72448 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || ||| | || || ||||| ||||||||| Sbjct 72447 GCTGCACTGCGACTTCGCCTGTTTGCTCTACA 72416 >seq938 Length=1173706 Score = 152 bits (168), Expect = 9e-32 Identities = 386/572 (67%), Gaps = 19/572 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| |||||||||||||| || || ||||| ||||| ||| | ||| || Sbjct 1021292 ATTTGGGAAATGTACAAGAAGGCCGAAGCTTCCTTTTGGACAGCCGAGGAGGTAGATTTG 1021233 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||| | | | |||| | || || | || ||| ||||||| |||| | Sbjct 1021232 TCGCAGGACCTCGCCCACTGGGAAGCCCTCACTGCCGATGAGAAGCATTTCATCAAACAT 1021173 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||| |||||||| ||||| ||||| || || |||||||| | || ||| Sbjct 1021172 GTTCTGGCCTTCTTTGCTGCCTCCGATGGCATCGTTTTGGAGAATCTAGCTGGCAGGTTC 1021113 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||||| ||| ||||| | | |||| ||||| |||||||| || ||||| Sbjct 1021112 ATGAAAGAAGTCCAGGTTTCCGAGGCGCGCGCGTTT-TACGGATTCCAGATTGCAATCGA 1021054 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGC 25772 || | ||||| ||| |||| || |||||| | || ||||| | ||| || Sbjct 1021053 GAACATCCACTCCGAGATGTA---CAGTCTTCTGCTCGAAACATACATCAAAGATTCGGC 1020997 Query 25773 CGAG-AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCA-GCATCAAGAGGAAGGCG 25830 |||| |||| ||| || || | || || || |||| |||| || | ||| |||||| Sbjct 1020996 CGAGAAGAG-TCGCCTCTTCCGAGCTATTGA-CACAGTCCCATGCGTGGAGAAGAAGGCC 1020939 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||||| | |||||| || | || | |||| ||||||||| | ||| Sbjct 1020938 AAGTGGGCCCTACGTTGGATCGACGG---ATCCGAATCTTTTGCCGAGCGGCTACTCGCC 1020882 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGC-GGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| || ||||| || || ||| | || | | ||| ||||| || ||| | || Sbjct 1020881 TTTGCTTGCGTTGAGGGGATATTCTTCTCCGGGAGCTTCTGC-GCCATATTTTGGTTGAA 1020823 Query 25950 GCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | | | | || | |||||| || | |||||||||||||| ||| || ||||||| Sbjct 1020822 G-AAACGCGGCCTCATGCCAGGATTAACTTTTTCCAACGAGCTAATCTCGAGAGACGAGG 1020764 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||| ||| | || || || |||||| | ||| Sbjct 1020763 GTCTGCACTGCGACTTCGCATGCCTGTTGTAC 1020732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 924180234298880