Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq33810 188 2e-43 >seq33810 Length=274286 Score = 188 bits (208), Expect = 2e-43 Identities = 470/712 (66%), Gaps = 25/712 (4%) Strand=Plus/Plus Query 45446 TATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATCGGACGGGA 45505 || || ||| |||||| || | | || ||||| ||||||| || || || || Sbjct 221150 TACCTCGACCTGCTGCGCCACGTGCTGGAGCACGGCACGGAGAAATCCGACCGCACCGGT 221209 Query 45506 ACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCG 45565 || ||||| ||||||||| | ||| ||||||| || | || || |||||| Sbjct 221210 ACCGGCACGCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGACCTCGCCGAAGGCTTCCCG 221269 Query 45566 CTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTA 45625 || || || || || ||| |||| | || ||| | | || ||| ||||||| | Sbjct 221270 CTGGTCACCACCAAGAAGCTGCACTTGAAGTCCATCGTCCACGAGCTGATCTGGTTCCTG 221329 Query 45626 AAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGG 45685 | ||||| || ||| | ||| | ||||| | || || | || |||||||| ||| Sbjct 221330 CAGGGCGACACCAATATCGCCTACCTCAAGGAGCACGGCGTCAGCATCTGGGACGAATGG 221389 Query 45686 GCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGG 45745 ||||| | ||||| | || ||||| |||||||| ||| ||||| |||||| Sbjct 221390 GCCGACGCGCACGGCAACCTGGGCCCGGTCTACGGCAGGCAGTGGCGCTCGTGGCCGACC 221449 Query 45746 GCTGACGGGAAAACGGTCGACCAAATT-GCGGCGGTCTTTAAGGAAATCAAGCGCAACCC 45804 || ||||| |||| ||||| || || | ||| | | || ||| |||||||| Sbjct 221450 GCCGACGGCGGCGCGGTGGACCAGATCCGCTG-GGTGGTGGACGAGATCCGCCGCAACCC 221508 Query 45805 GAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTT 45864 | ||||| ||| || | || |||||||||||||||| || || | | ||| | | Sbjct 221509 CGATTCGCGCCGGCTGATCGTCAGCGCGTGGAACGTGGGCGAGCTGCCGAAGATGGCGCT 221568 Query 45865 GCCCCCATGTCATTACGCCTTTC-AGTTTTACGTCGC-----------------GAATGG 45906 | || || || |||| ||| |||| ||||| || || || Sbjct 221569 GATGCCCTGCCAC-ACGCTGTTCCAGTTCTACGTGGCCCCTTCGACGGGCTCAGGACAGG 221627 Query 45907 CCGGT----TGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGT 45962 | || || ||| | | | ||||| || | ||| | || || || |||||| Sbjct 221628 CGGGCAAGCTGAGCTGCCAGCTGTACCAGCGCTCCGGCGACATCTTCCTCGGCGTGCCGT 221687 Query 45963 TTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATG 46022 | |||||||| |||||||||||| | || || ||||| || || |||| || | | Sbjct 221688 TCAACATCGCCAGCTATGCGCTGCTCACCCACATGGTGGCGCAGGTGTGCGGGCTGGGCG 221747 Query 46023 TCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAG 46082 | ||||| || | ||| ||||||| ||| ||||||| || ||| ||||||| | Sbjct 221748 TGGGCGACTTCGTGCACACGCTGGGCGACGCGCATCTGTACAACAACCATGTGGAACAGG 221807 Query 46083 CGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAA 46134 || |||||||||||| |||||||||||||| ||||| ||| ||| |||| Sbjct 221808 CGCGACTGCAGCTGACCCGCGAGCCGCGCCCCTTGCCGCGGCTGGTGCTCAA 221859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156997803602928