Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq33768 131 7e-26 seq78578 102 3e-17 >seq33768 Length=156001 Score = 131 bits (144), Expect = 7e-26 Identities = 234/334 (70%), Gaps = 11/334 (3%) Strand=Plus/Plus Query 9695 CATGGCATCCG---TCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAAC 9751 ||||||| || ||||||| |||||| |||||||||| || || ||||| |||||||| Sbjct 53116 CATGGCACGCGGCATCAACAAGGTCATCATCGTCGGCAACCTAGGCGCCGATCCGGAAAC 53175 Query 9752 CCGCTATCTCCCG-AGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTT 9810 |||||| | || | |||||| ||| ||| ||| | | ||| |||| || | || | | Sbjct 53176 CCGCTA-CACCGGCAGCGGCACCGCCATCACCAGCCTGCGCATCGCCACTTCGGAACAGT 53234 Query 9811 ACAAGGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCT 9870 | ||||| |||||||| | | || ||||| ||||||||||| | | Sbjct 53235 GGACCGACAAGCAGAGCGGCGAGCGCCAGGAGCGCACCGAATGGCACCGCGTGAAGCTGT 53294 Query 9871 TCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGC--GCATCGGTCTACAT 9928 ||||| || |||||||||| || |||| ||||| || ||| ||| ||||||||| Sbjct 53295 TCGGCAAGCTGGCCGAGATCGCCGGCGAGTACCTGAAGAAAGGCCGGCA--GGTCTACAT 53352 Query 9929 CGAGGG-GCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGA 9987 |||||| ||| | | || |||| || | |||| || |||||| | | Sbjct 53353 CGAGGGTTCGCTGCGCACCG-ACAAGTACACCGACAAGGACGGCATCGAGCGCTACTCCA 53411 Query 9988 CCGAGATCGTCGCCGACAAGATGCAGATGCTCGG 10021 |||| ||| ||||| || ||||||||||||| || Sbjct 53412 CCGACATCATCGCCAACGAGATGCAGATGCTGGG 53445 >seq78578 Length=1014 Score = 102 bits (112), Expect = 3e-17 Identities = 214/311 (69%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 9704 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCGCTATCTCCC 9763 |||||||||||| || ||||||||||| ||| | |||||||||| |||||| ||| Sbjct 538 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 479 Query 9764 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAAGGACAAAGC 9823 || |||| |||| | | ||||| ||| || || | ||| | | || || || Sbjct 478 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 419 Query 9824 CAGCGGCGACTTCA-AAGAAGTG-ACCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTC 9881 | |||| | || || || | ||||||||||||||||| | ||||||||| || Sbjct 418 GACCGGC--CAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATC 361 Query 9882 GCCGAGATCGTCGACGAGCACCTGCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCA 9939 ||||| |||| | ||| | ||||| ||||| || | || |||| |||| || Sbjct 360 GCCGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTC 303 Query 9940 TCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCG 9999 || || || |||| ||| || ||| | | |||||||| ||||||||||||| Sbjct 302 TCCGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCG 246 Query 10000 CCGACAAGATG 10010 |||| || || Sbjct 245 TCGACCAGGTG 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200335858480536