Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq35681 143 5e-30 >seq35681 Length=3718 Score = 143 bits (158), Expect = 5e-30 Identities = 680/1047 (65%), Gaps = 64/1047 (6%) Strand=Plus/Plus Query 11188 CACCGCGCAGAGCTACACCGGCAACCTGTATCTCGATGAATATTTCTGGATACCGAAATT 11247 ||| |||||||||||| |||| || | || |||| ||| |||||||| || || || Sbjct 63 CACGGCGCAGAGCTACCACGGCCACGTCTACATCGACGAAGTGTTCTGGATCCCCAATTT 122 Query 11248 CCAGGAGCTGCGAAAGGTCGCCAGCGGCATGTCGCTGCAT-AAAAAGTGGCGCACCACCT 11306 |||| |||||| | ||| ||||||| ||| | |||| ||||||||||| |||| Sbjct 123 CCAGAAGCTGCAGACGGTGGCCAGCGCGATGGCCTCGCATGCAAAAGTGGCGCCTGACCT 182 Query 11307 ACTTTTCCACGCCGTCGAGC-CTGT--CGCACTCCGCTTATCCGTTCTGGTCGGGCGAGC 11363 |||| ||||||| | ||| | || ||||| || ||||||| |||| | |||||| Sbjct 183 ACTTCTCCACGC---CCAGCGCGGTAACGCACCAGGCATATCCGTACTGGACCGGCGAGG 239 Query 11364 TGTTCAACAAAGGGCGGCGCAGCAAAGCCGATCGCATCGAAATCGACCTGTCGCATACGC 11423 |||| ||| | |||| | |||| | || || | | || | || | ||| Sbjct 240 AGTTCCGCAACAGCAAGCGC-GGAAAGAAGGCCGGGCCG---TGGCCCAG-CG-AAGCGC 293 Query 11424 A---CCTGGCAAAAGGCGCGCTGTGCGGTGACGGCCAGTGGCGGCAGATTGTGACGGTTG 11480 | || || |||||| ||||| ||||| |||||||| || | | ||| || Sbjct 294 AGATCCATGC---CGGCGCGTTGTGCCCGGACGGGCAGTGGCGCAAGGTCATCACGATTC 350 Query 11481 AGGATGCGCTGACCGGCGGCTGTAACCTGTTTGACCTCGACCAGCTCCAGCTGGAATAC- 11539 | || || | |||||||||| |||||||| ||||| || | || |||||||| ||| Sbjct 351 AAGACGCCATCGCCGGCGGCTGCAACCTGTTCGACCTGGAGCGCCTGCAGCTGGAGTACG 410 Query 11540 ------AGCCCGTCGGAATACCAGAACCTGCTGATGTGTGAGTTTGTGGACGATGAGGCG 11593 ||| | ||| | ||| ||| | ||||| |||| | ||| | | | Sbjct 411 ACGAAGAGCGCTTCG----AACAG---CTGTTCATGTGCAAGTTCATCGAC-AGCACCCA 462 Query 11594 AGC-GTGTTCCCGTTCGCCGAGCTGCAGACCTGCATGATCGACAGCCTGGAGGAATGGAG 11652 || | ||| | || |||| ||| || |||| | || | | ||| ||||| Sbjct 463 GGCTGCATTCGCCTTGACCGACCTGGAGCGCTGC-TATTC--CGACTTGGGCCTATGGAC 519 Query 11653 CGACTTTAACCCGTACCTGCCGCGCCCGTTTGATTACCGCCCGGTCTGGATTGGCTACGA 11712 |||| ||||| || ||||| ||||| || |||||||||||||| | || || || Sbjct 520 TGACTACGACCCGGACAGCCCGCGGCCGTTCGACAACCGCCCGGTCTGGCTCGGGTATGA 579 Query 11713 CCC--GTCGCACAC-CGGCGACAGCG-CAGGCTGTGCCGTTATCGCGCCGCCGCTGGTTG 11768 ||| |||| || | || |||| ||| | || || |||| || ||||| |||| Sbjct 580 CCCCAGTCGAACCCGCGACGAC-GCGACGTGCGTTGTCGTT---GCCCCGCCCCTGGAGC 635 Query 11769 CGGGCGGCAAGTTTCGCGTGCTGGAGCGTCACCAGTGGCGGGGCATGGACTTTGCCGC-G 11827 ||||||||||||| || | |||||| ||| |||||||| | | | || ||| Sbjct 636 CGGGCGGCAAGTTCCGAATCCTGGAGAAGCACAGCTGGCGGGGGA-CGTCGTTCACGCAT 694 Query 11828 CAGGCAAAATCCATTGAGGA-CTTAACGAAAAAATACACCGTCGAGTATATCGGCGTGGA 11886 |||||||| || ||| | || || | | || |||| || | |||||| | || Sbjct 695 CAGGCAAAGCAGATCGAGAAGCTGTGCG-AGCGCTTCAACGTCCAGCACATCGGCATCGA 753 Query 11887 TGCGACCGGCATCGGCCAGGGCGTTTTCCAGCTGGTTCGCCAGTTCTACCCGGCGGCGCG 11946 |||||| |||| | || || ||| | ||||| | |||| ||| ||| Sbjct 754 CATTACCGGCGTCGGTTACGGGGTGTTCGACCTGGTGAAAGACTTCTTCCCCCGGGCTAC 813 Query 11947 TGAAATCCGTTACTCGCCGGAAGTGAAAACCGCGATGGTGCTGAAGGCAAAAGACACCAT 12006 | || | ||| | ||| | ||| | || ||||||| ||||| | ||| || Sbjct 814 TCCGATTCACTACAGCCTGGAGGCGAAGAATGCCCTGGTGCTCAAGGCCCAGGACGTGAT 873 Query 12007 CAGCAGCGGA--CGCCTGGAATACGATGCGGGCCAGACCGACATTACGCAGTCTTTTATG 12064 | ||| | | ||| | |||| ||||| || |||||| | || | | || || Sbjct 874 C--CAGGGCAAGCGCATCGAATGGGATGCCGGTTGGACCGAGGTCGCGGCGGCGTTCCTG 931 Query 12065 GCAATC---CGCAAAACCATGACCGCCAGCGGCAACCGCTCCACCTATGAGGCGAGCCGC 12121 | ||| ||| ||| || ||||||||| | | | ||||| ||| | Sbjct 932 TCGATCAAGCGCGGCACC---ACGGCCAGCGGC--CTGAT-TACCTACAGCGCGTCTAGG 985 Query 12122 AGCGAGGACGCCAGCCACGCCGACGTCGCCTGGGCAATCATGCACGCCCTGCTTAACGAA 12181 | |||| || |||| |||||||| |||||| | |||||||| || ||| | | ||| Sbjct 986 ACTGAGGCAACCGGCCATGCCGACGTGGCCTGGTCGATCATGCATGCGCTGGCTCATGAA 1045 Query 12182 CCGCTGACCGC-CGCCAGCGGCGGCGC 12207 || |||| | | | ||||||||||| Sbjct 1046 CCCCTGAACACAAACAAGCGGCGGCGC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94032439077024