Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq24293 553 5e-153 seq32758 188 2e-43 seq5280 168 2e-37 seq27014 165 2e-36 seq32305 147 7e-31 seq1151 129 2e-25 seq28127 111 5e-20 seq16835 89.7 2e-13 >seq24293 Length=256785 Score = 553 bits (612), Expect = 5e-153 Identities = 721/992 (73%), Gaps = 4/992 (0%) Strand=Plus/Plus Query 17828 GATTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCC 17887 ||| | ||||| |||||| |||||||||||||||||||| || ||||||||||| | || Sbjct 205427 GATAGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACC 205486 Query 17888 AAGGTTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTA 17946 ||||||||| | ||| | | |||||||| ||| | || | ||| ||| | | Sbjct 205487 AAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATTACACGCCCTTG-GCTATCAA 205545 Query 17947 CAATGGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAG 18006 | | ||||||||||| ||||| ||||| || || |||||||||||| || || | || Sbjct 205546 CTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAG 205605 Query 18007 AGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTAT 18066 |||| ||| || | || ||||||||||| | ||| || |||| | | Sbjct 205606 CAGTAAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAAAAGTGTAATGAACGAGAGT 205665 Query 18067 TGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATAT 18126 |||| || |||||||| |||||||| | || ||||| || |||||||| || || |||| Sbjct 205666 TGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATAT 205725 Query 18127 TATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCG 18186 |||| || ||||| ||||| || ||| | || || | || ||| ||| || || | Sbjct 205726 TATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGG 205785 Query 18187 TTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCAC 18246 |||| || || | ||||| || | || ||||||||| ||||| | || | Sbjct 205786 TTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGC 205845 Query 18247 CGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTT 18306 ||||||| || || ||||| | ||| || || || ||||||||||| ||||| || || | Sbjct 205846 CGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCT 205905 Query 18307 GGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAAC 18366 ||||||| | ||| |||||||||||||| ||| || ||||||||||||||||| |||| Sbjct 205906 GGAATACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAAC 205965 Query 18367 TCCCTTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAA 18425 | ||||| || | || |||| | ||||| |||| | ||||| || || || || ||| Sbjct 205966 TTCCTTGACCTATTGGGTAAATCAAGAAA-ACTGCGGTAGCAGCGGCAACAGGAGCTGAA 206024 Query 18426 TAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 18485 || |||||| |||||| || |||||||| || | ||||||||||||| | || ||| Sbjct 206025 TATGCAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 206084 Query 18486 ATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 18545 |||||| || | || | | ||||| | || || | || ||| || || ||||| Sbjct 206085 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTTG 206144 Query 18546 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 18605 |||||||| || || | || ||| ||||||||||||||||| ||||| | ||| || || Sbjct 206145 TATAACCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCT 206204 Query 18606 TTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAG 18665 ||| | || | || || ||||| || || |||||||| || |||| | ||| || Sbjct 206205 GCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 206264 Query 18666 ACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAAT 18725 ||||| |||||||||||||| || || || ||||||||||||| || ||||| | |||| Sbjct 206265 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAAT 206324 Query 18726 GCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGG 18785 | | || |||||| || | | ||||||||| | || |||||||| || | ||| || Sbjct 206325 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGA 206384 Query 18786 CGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 || || | || || || | ||||| ||| || Sbjct 206385 CGATTTTCGGTGCTGGTTATCCAGTTACAGAA 206416 >seq32758 Length=53022 Score = 188 bits (208), Expect = 2e-43 Identities = 224/300 (75%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 18246 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCT 18305 |||||||| || || ||||| | ||| || || || ||||||||||| ||||| || || Sbjct 20700 CCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 20759 Query 18306 TGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAA 18365 |||||||| | ||| |||||||||||||| ||| || ||||||||||||||||| ||| Sbjct 20760 TGGAATAC-ATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 20818 Query 18366 CTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGA 18424 || ||||| || | || |||| | ||||| |||| | ||||| || || || || || Sbjct 20819 CTTCCTTGACCTATTGGGTAAATCAAGAAA-ACTGCGGTAGCAGCGGCAACAGGAGCTGA 20877 Query 18425 ATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCC 18484 ||| |||||| |||||| || |||||| | || | ||||||||||||| | || || Sbjct 20878 ATATGCAACAGCAATCCAAGGTCGCATATCCAGACGGAAACTAAGTTCCCACTCACGACC 20937 Query 18485 CATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 18544 ||||||| || | || | | ||||| | || || | || ||| || || ||||| Sbjct 20938 CATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTT 20997 >seq5280 Length=204759 Score = 168 bits (186), Expect = 2e-37 Identities = 223/308 (72%), Gaps = 1/308 (0%) Strand=Plus/Plus Query 18510 AAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCA 18569 ||||| | || || | || ||| || || ||||| |||||||| || || | || ||| Sbjct 154068 AAGTGTAGAACTATTATTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCT 154127 Query 18570 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 18629 ||||||||||||||||| ||||| | ||| || || | | | || | || || ||| Sbjct 154128 GCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCATAAGTAGGAATAATGGCACCT 154187 Query 18630 GATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATG 18689 || || || || ||||| || |||| | ||| || ||||| ||||| |||||||| || Sbjct 154188 GAGATAATATTTTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACG-ATACCATCAATA 154246 Query 18690 TCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCA 18749 || || ||||||||||||| || ||||| | |||| | || |||||| || | | | Sbjct 154247 TCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCGGTCAATAAGGTA 154306 Query 18750 GGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAG 18809 |||||||| | || |||||||| || | ||| || || || | || || || | |||| Sbjct 154307 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGTGCTGGTTATCCAG 154366 Query 18810 TCACATAA 18817 | ||| || Sbjct 154367 TTACAGAA 154374 >seq27014 Length=84001 Score = 165 bits (182), Expect = 2e-36 Identities = 259/362 (72%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 18132 GTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCT 18191 || ||||| ||||| || ||| | || || | || ||| ||| || | ||||| Sbjct 20268 GTTTCTTCCTCTTGACCTAATCTGTAACCTTCATTAGCAGATTCATTTTCTTTGGTTTCC 20209 Query 18192 CTAAT-AAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250 || || || || || || |||| || ||||||||| || || | || |||| Sbjct 20208 CTGATCAAACTAGAAATTACCAAGGAA-CCATGCATAGCACTGA-TAGGGAGCCGCCGA- 20152 Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||| || || ||||| | ||| || || || ||||||||||| ||||| || || ||||| Sbjct 20151 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 20092 Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370 ||| | ||| |||||||| |||| ||| || |||| |||| ||||||| ||||| | Sbjct 20091 TACAATCATAAAATTGAA--TACCAGAAATTCCTAGAGACATATCATCAGAAAAACTTGC 20034 Query 18371 TTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAG 18429 ||| || | ||||||| | ||||| |||| | ||||| || | || | ||||| | Sbjct 20033 TTGACCTATTGGATAAATCAAGAAA-ACTGCGGTAGCAGCGGCAATAGGAGTTGAATATG 19975 Query 18430 CAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGT 18489 ||||| |||||| || |||||||| || | ||||||||||||| | || ||||||| Sbjct 19974 CAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT 19915 Query 18490 AA 18491 || Sbjct 19914 AA 19913 >seq32305 Length=14517 Score = 147 bits (162), Expect = 7e-31 Identities = 180/246 (73%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 18527 TTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTA 18586 || ||| || || |||| |||||||| || || | || || |||||||||||||| || Sbjct 12487 TTCATAAGGACCGTCGTTGTATAACCATTCATCAACGGATGTTGCTTCCCAGATTGGATA 12546 Query 18587 GAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCC 18646 ||||| | ||| || || ||| | || | || || ||||| || || |||||||| Sbjct 12547 AAAGTGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCC 12606 Query 18647 ATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGC 18706 || |||| | ||| || ||||| |||||||||||||| || || || |||| |||| | Sbjct 12607 GTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGAAGCAAC 12666 Query 18707 AACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCC 18766 || || | ||| | |||| | | || |||||| || | | ||||||||| | || || Sbjct 12667 AATGAAGGAAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACC 12726 Query 18767 AAACCA 18772 |||||| Sbjct 12727 AAACCA 12732 >seq1151 Length=20901 Score = 129 bits (142), Expect = 2e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 18624 GCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCA 18683 || ||||| || || |||||||| || |||| | ||| || ||||| ||| |||||||| Sbjct 11423 GCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCATGAATACCA 11364 Query 18684 TCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAA 18743 || || || || ||||||||||||| || ||||| | |||| | | || | |||| || Sbjct 11363 TCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTTCGGTCAAT 11304 Query 18744 AGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGTA 18803 | ||||||||||||| || |||||||| || | ||| || || || | || || || Sbjct 11303 AAGGCAGGGATCATAAAAACACCAAACCATCCAAAGTAAAGACGATTTTCGGTGCTGGTT 11244 Query 18804 ACCCAGTCACATAA 18817 | ||||| ||| || Sbjct 11243 ATCCAGTTACAGAA 11230 >seq28127 Length=41111 Score = 111 bits (122), Expect = 5e-20 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 18338 AATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATA 18396 ||| || ||||||||||||||||| ||||| ||||| || | || |||| | ||||| | Sbjct 29698 AATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCTATTGGGTAAATCAAGAAA-A 29640 Query 18397 CTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTA 18456 ||| | ||||| || || || || ||||| |||||| |||||| || |||||| | | Sbjct 29639 CTGCGGTAGCAGCGGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATATCCA 29580 Query 18457 GTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGA 18516 | | ||||||||||||| | || ||||||||| || | || | | ||||| | Sbjct 29579 GACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTA 29520 Query 18517 ACACAATGAGTTGATATGGTCCTCCGTT 18544 || || | || ||| || || ||||| Sbjct 29519 GAACTATTAATTCATAAGGACCGCCGTT 29492 >seq16835 Length=343710 Score = 89.7 bits (98), Expect = 2e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 18351 ATACCATCAGAGAAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAGGCAGC 18409 ||||||||||| ||||| | ||| || | || |||| | ||||| |||| | ||||| Sbjct 191685 ATACCATCAGAAAAACTTCTTTGACCTATTGGGTAAATCAAGAAA-ACTGCGGTAGCAGC 191743 Query 18410 TGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAG 18469 || || || || ||||| |||||| |||||| || |||||||| || | ||||||| Sbjct 191744 GGCAACAGGAGCTGAATATGCAACAACAATCCAAGGTCGCATACCCAGACGGAAACTAAG 191803 Query 18470 TTCCCATTGTCGTCCCATGTA 18490 || ||| | || |||||||| Sbjct 191804 TTTCCACTCACGACCCATGTA 191824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150596489420688