Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq24293 488 2e-133 seq32758 176 1e-39 seq27014 154 4e-33 seq5280 116 1e-21 seq28127 104 7e-18 seq28567 98.7 3e-16 seq16835 91.5 4e-14 seq32305 87.8 5e-13 >seq24293 Length=256785 Score = 488 bits (540), Expect = 2e-133 Identities = 684/957 (71%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 41261 AACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTAC 41319 || |||||||| | |||||||| || || | ||||| || | ||| ||| |||| || Sbjct 206389 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 206331 Query 41320 AACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGA 41379 || |||||||| ||||| ||| || || || || || || ||||| || || || Sbjct 206330 TTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 206271 Query 41380 ACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAG 41439 ||| || |||| || || | || || ||||| || || ||||| ||| | |||| | Sbjct 206270 ACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTAC 206211 Query 41440 CAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATG 41499 | || || || | ||||| |||||||| |||||||| || | |||||||||| Sbjct 206210 TTCTGCAGCTATTGGTTTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATG 206151 Query 41500 GCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGC 41559 | | |||||||||||||| | || | | || | |||||| | |||| || | Sbjct 206150 GTTATACAACGGCGGTCCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTG 206091 Query 41560 TTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGT 41619 ||||||||| || |||||||||||||| | || || || ||| | || ||||| ||| Sbjct 206090 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 206031 Query 41620 TGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACA 41679 ||| || || |||||||| |||||||| || || || ||| | |||| || | || || Sbjct 206030 TGCATATTCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCA 205971 Query 41680 GGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGT 41739 || ||||||||||| |||||| | || || || || || ||||| | ||| | || Sbjct 205970 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGT 205911 Query 41740 GTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGT 41799 ||||||||||||||||| || |||||||| || ||||||||| | ||||| || || || Sbjct 205910 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 205851 Query 41800 ATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCG 41859 ||| || || | ||| ||||||||| ||| | |||| || || | || | Sbjct 205850 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 205791 Query 41860 TGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGAC 41919 || || || ||| | | || || | ||||||| || |||||||||||||| || Sbjct 205790 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 205731 Query 41920 TTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTT 41979 ||| ||||| || || ||||| || |||||||| || | ||||||||||||||||| || Sbjct 205730 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 205671 Query 41980 TAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTT 42039 || || || ||| | || || || || ||||| |||||||| || ||||| ||||| Sbjct 205670 CAACAACTCTCGTTCATTACACTTTTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTT 205611 Query 42040 TGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATC 42099 | |||| | || | || |||||||||||| | ||||||||||| || |||||||| Sbjct 205610 TACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 205551 Query 42100 TCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAA 42159 | | | | | || | || || || || |||||||| ||| |||||||||| || Sbjct 205550 AGTAGTTGATAGCCAAGGGCGTGTAATTAATACTTGGGCTGATATTATTAACCGTGCTAA 205491 Query 42160 CCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 |||||| | || || |||||||| || || || || |||||||| || || || || Sbjct 205490 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 205434 >seq32758 Length=53022 Score = 176 bits (194), Expect = 1e-39 Identities = 219/299 (73%), Gaps = 1/299 (0%) Strand=Plus/Minus Query 41507 AACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATG 41566 ||||||||||| | || | | || | |||||| | |||| || | ||||||| Sbjct 20997 AACGGCGGTCCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 20938 Query 41567 GGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTAC 41626 || || |||||||||||||| | || || | ||| | || ||||| |||||| || Sbjct 20937 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 20878 Query 41627 TCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCT 41686 || |||||||| |||||||| || || || ||| | |||| || | || || || | Sbjct 20877 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 20818 Query 41687 TTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAG 41746 |||||||||| |||||| | || || || || || ||||| | ||| | || |||||| Sbjct 20817 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT-GTATTCCAG 20759 Query 41747 GCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGG 41805 ||||||||||| || |||||||| || ||||||||| | ||||| || || ||||| || Sbjct 20758 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 20700 >seq27014 Length=84001 Score = 154 bits (170), Expect = 4e-33 Identities = 180/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 41560 TTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGT 41619 ||||||||| || |||||||||||||| | || || || ||| | || ||||| ||| Sbjct 19913 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 19972 Query 41620 TGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACA 41679 ||| || || ||||| | |||||||| || || || ||| | ||||||| | || || Sbjct 19973 TGCATATTCAACTCCTATTGCCGCTGCTACCGCAGTTTTCTTGATTTATCCAATAGGTCA 20032 Query 41680 GGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGT 41739 | ||||||||||| |||| | | || || || || | ||||| | ||| | || Sbjct 20033 AGCAAGTTTTTCTGATGATATGTCTCTAGGAATTTCTGGTA--TTCAATTTTATGATTGT 20090 Query 41740 GTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGT 41799 ||||||||||||||||| || |||||||| || ||||||||| | ||||| || || || Sbjct 20091 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 20150 Query 41800 AT 41801 || Sbjct 20151 AT 20152 >seq5280 Length=204759 Score = 116 bits (128), Expect = 1e-21 Identities = 185/259 (71%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 41261 AACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTAC 41319 || |||||||| | |||||||| || || | ||||| || | ||| ||| |||| || Sbjct 154347 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 154289 Query 41320 AACTTGT-TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAG 41378 |||| |||||||| ||||| ||| || || || || || || ||||| ||| | | Sbjct 154288 TT-TTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATC-GTG 154231 Query 41379 AACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGA 41438 |||| || |||| || || | || || || || || || ||||| ||| | |||| | Sbjct 154230 AACCTGTTTCTGGATCTCTACTTTACGGAAAAAATATTATCTCAGGTGCCATTATTCCTA 154171 Query 41439 GCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAAT 41498 | || || || | ||||| |||||||| |||||||| || | ||||||||| Sbjct 154170 CTTATGCAGCTATTGGTTTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAAT 154111 Query 41499 GGCTGTACAACGGCGGTCC 41517 || | |||||||||||||| Sbjct 154110 GGTTATACAACGGCGGTCC 154092 Score = 93.3 bits (102), Expect = 1e-14 Identities = 175/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 41774 TTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGT 41833 ||||||||| | ||||| || || || || || || | ||| | ||||||| ||| Sbjct 175408 TTTCACATGTTAGGTGTAGCTGGTGTGTTCGGCGGCTCCCTATTCAGTTCTATGCATGGT 175467 Query 41834 AGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGT 41893 | | || || || | ||| | || || || || | | || | || | ||| Sbjct 175468 TCCTTTGTAACTTCTAGTTTGATTAGGGAAACCACATAAAATGAATCTGATAATGAAGGT 175527 Query 41894 TACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGT 41953 |||| || ||||||||||||| ||||| ||||| || || ||||| || |||||||| Sbjct 175528 TACAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGA 175587 Query 41954 CGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT-GC 42012 || | |||||||||||||||| || || || | ||| || | | |||||| | Sbjct 175588 CGATTGTTCTTCCAATATGCTAGTTTCAACAACTTTCGT-TAATTAAAATTTTTCTTAGA 175646 Query 42013 TGCCTGGCCTGTTGT 42027 | | ||||||||||| Sbjct 175647 TTCTTGGCCTGTTGT 175661 >seq28127 Length=41111 Score = 104 bits (114), Expect = 7e-18 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 41507 AACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATG 41566 ||||||||||| | || | | || | |||||| | |||| || | ||||||| Sbjct 29492 AACGGCGGTCCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 29551 Query 41567 GGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTAC 41626 || || |||||||||||||| | || || | ||| | || ||||| |||||| || Sbjct 29552 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 29611 Query 41627 TCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCT 41686 || |||||||| |||||||| || || || ||| | |||| || | || || || | Sbjct 29612 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 29671 Query 41687 TTTTCTGATGCTATGCC 41703 |||||||||| |||||| Sbjct 29672 TTTTCTGATGGTATGCC 29688 >seq28567 Length=163623 Score = 98.7 bits (108), Expect = 3e-16 Identities = 143/200 (72%), Gaps = 14/200 (7%) Strand=Plus/Minus Query 42020 CCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAAT 42079 ||||| || |||||||||||| |||| | || | || |||||||||||| | ||| Sbjct 84167 CCTGTAGTGGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 84108 Query 42080 GGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACA--GGTG----ATCAACACC 42133 |||||||| || |||||||| || | |||| | || |||| || || | Sbjct 84107 GGTTTCAATTTCAACCAATC------AGTAGTTGATAGCCAAGGGTGTGTAATTAATTCT 84054 Query 42134 TGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCA 42193 |||| ||| || ||||| |||| |||| |||| | || || |||||||| || || || Sbjct 84053 TGGGATGATAT--TTAACTGTGCTAACCATGGCATGGAAGTTATGCATGAACGAAATGCT 83996 Query 42194 CACAACTTCCCGCTTGACCT 42213 || |||||||| || || || Sbjct 83995 CATAACTTCCCTCTAGATCT 83976 >seq16835 Length=343710 Score = 91.5 bits (100), Expect = 4e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 41561 TACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTT 41620 |||||||| || |||||| ||||||| | || || || ||| | || ||||| ||||| Sbjct 191824 TACATGGGTCGTGAGTGGAAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGTTGTT 191765 Query 41621 GCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAG 41680 || || || |||||||| |||||||| || || || ||| | |||| || | || || Sbjct 191764 GCATATTCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAA 191705 Query 41681 GGCTCTTTTTCTGATGCTAT 41700 | ||||||||||| ||| Sbjct 191704 AGAAGTTTTTCTGATGGTAT 191685 >seq32305 Length=14517 Score = 87.8 bits (96), Expect = 5e-13 Identities = 165/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 41279 TGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGC 41337 ||||| || || | ||||| || | ||| ||| |||| || || |||||||| | Sbjct 12732 TGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATTTC 12674 Query 41338 CTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCT 41397 ||| ||| || | || || || || ||||| || || ||||| || |||| || || Sbjct 12673 CTTCATTGTTGCTTCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCT 12614 Query 41398 GTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACT 41457 | || || ||||| || || ||||| ||| | |||| | | || || || | Sbjct 12613 ACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTT 12554 Query 41458 ACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCC 41517 ||||| || ||||| |||||||| | | ||||||||||| | ||||||| |||||| Sbjct 12553 GCACTTTTATCCAATCTGGGAAGCAACATCCGTTGATGAATGGTTATACAACGACGGTCC 12494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145516839609408