Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq24293 551 2e-152 seq32758 158 3e-34 seq5280 149 2e-31 seq27014 141 3e-29 seq32305 140 9e-29 seq1151 132 1e-26 seq28567 122 2e-23 >seq24293 Length=256785 Score = 551 bits (610), Expect = 2e-152 Identities = 724/995 (73%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || || | || |||||||| |||| |||||| Sbjct 206425 TGGGGTCGCTTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTT 206366 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| | || |||| Sbjct 206365 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCA 206308 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||||| || | Sbjct 206307 TTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTT 206248 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 | || ||||| || ||||| |||||| | | |||| | || ||||| | || | Sbjct 206247 ACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCACT 206188 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || | ||||||||||| || |||| |||||| | ||||| ||||| |||||| Sbjct 206187 TTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATG 206128 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 | | | || | |||||| | | ||| | | |||| |||| || || ||||||| Sbjct 206127 AATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 206068 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| || || ||| | || ||||| |||||| || || || ||||| || | Sbjct 206067 TTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCCG 206008 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || || ||||| ||| | | || ||| | || ||||| |||||| ||||| |||| Sbjct 206007 CTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGTTTTTCTGATGGTATGC 205948 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| || ||||| ||||| ||||| || ||| | || ||||||||||| || ||||| | Sbjct 205947 CTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTCCAGGCTGAGCACAACATCC 205888 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||| || || || ||| | ||||| || || ||||| || || || | ||| | Sbjct 205887 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 205828 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 205827 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 205768 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || |||| |||||||||||||| || |||||||| || || || || |||| Sbjct 205767 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATG 205708 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || || ||| || || ||| Sbjct 205707 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCATTACAC 205649 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 || || || || |||||||| || ||||| || ||||| ||| || | || | || ||| Sbjct 205648 TTTTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATTAGCACT 205589 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 ||||| || ||| | |||||||| || || ||||||||| | ||||||| || | | Sbjct 205588 ATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGCGT 205529 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || |||||||||||||||| | || ||||| |||||||| | || || ||||| Sbjct 205528 GTAATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCAT 205469 Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || || ||||| ||||||||||| || ||||| || Sbjct 205468 GAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 205434 >seq32758 Length=53022 Score = 158 bits (174), Expect = 3e-34 Identities = 215/299 (72%), Gaps = 1/299 (0%) Strand=Plus/Minus Query 42562 AATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTG 42621 || ||||| |||||| | | | || | |||||| | | ||| | | |||| || Sbjct 20997 AACGGCGGTCCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 20938 Query 42622 GGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTAC 42681 || || || ||||||||| | ||| || | ||| | || ||||| |||||| || Sbjct 20937 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 20878 Query 42682 TCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCT 42741 || || ||||| || || || || ||||| ||| | | || ||| | || ||||| | Sbjct 20877 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 20818 Query 42742 TTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAG 42801 ||||| ||||| |||||||| || ||||| ||||| ||||| || ||| || | |||||| Sbjct 20817 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATG-TATTCCAG 20759 Query 42802 GCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 ||||| || ||||| |||||||| || || || ||| | ||||| || || ||||| || Sbjct 20758 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 20700 >seq5280 Length=204759 Score = 149 bits (164), Expect = 2e-31 Identities = 211/290 (73%), Gaps = 5/290 (2%) Strand=Plus/Minus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 || ||||||||| | || || | || |||||||| |||| ||||||||||| || Sbjct 154374 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 154315 Query 42349 ATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCC 42406 ||||| |||| || | | | || || ||| |||||| | || ||||||||||| | Sbjct 154314 ATGAT-CCCTACCTTATTGACCGCAACTTT-TGTATTTATTATTGCCTTCATTGCTGCTC 154257 Query 42407 CTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACA 42466 |||| ||||| |||||||| || ||||||||||| ||||| ||||| || || || || | Sbjct 154256 CTCCAGTAGATATTGATGGTAT-CGTGAACCTGTTTCTGGATCTCTACTTTACGGAAAAA 154198 Query 42467 ACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGA 42526 | || ||||| |||||| | | |||| | || ||||| | || || || | | Sbjct 154197 ATATTATCTCAGGTGCCATTATTCCTACTTATGCAGCTATTGGTTTGCACTTTTACCCAA 154138 Query 42527 TCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTAT 42576 |||||||||| || |||| |||||| | ||||| ||||| |||||| Sbjct 154137 TCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTAT 154088 Score = 96.9 bits (106), Expect = 1e-15 Identities = 178/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 42829 TTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888 || || ||| | ||||| || || || || || || || | ||| ||||||||||| Sbjct 175408 TTTCACATGTTAGGTGTAGCTGGTGTGTTCGGCGGCTCCCTATTCAGTTCTATGCATGGT 175467 Query 42889 AGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGC 42948 |||| || ||| | | | | ||||| || |||| ||| | ||| | || Sbjct 175468 TCCTTTGTAACTTCTAGTTTGATTAGGGAAACCACATAAAATGAATCTGATAATGAAGGT 175527 Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008 |||| ||| |||||||||| || |||||||| || || || || |||||||| |||||| Sbjct 175528 TACAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGA 175587 Query 43009 CGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTT-G 43066 || | ||||||||||||| | |||| || || ||| | || | || |||||| | Sbjct 175588 CGATTGTTCTTCCAATATGC-TAGTTTCAACAACTTTCGTTAATTAAAATT-TTTCTTAG 175645 Query 43067 CCGCTTGGCCCGTTGT 43082 ||||||| ||||| Sbjct 175646 ATTCTTGGCCTGTTGT 175661 >seq27014 Length=84001 Score = 141 bits (156), Expect = 3e-29 Identities = 250/361 (69%), Gaps = 4/361 (1%) Strand=Plus/Plus Query 42615 TTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGT 42674 |||| |||| || || ||||||||| | ||| || || ||| | || ||||| ||| Sbjct 19913 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 19972 Query 42675 TGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCA 42734 ||| || || | ||| | || || || || ||||| ||| | | |||||| | || || Sbjct 19973 TGCATATTCAACTCCTATTGCCGCTGCTACCGCAGTTTTCTTGATTTATCCAATAGGTCA 20032 Query 42735 AGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGT 42794 || |||||| |||| ||| |||| || ||||| |||| ||||| || ||| | || Sbjct 20033 AGCAAGTTTTTCTGATGATATGTCTCTAGGAATTTCTGGTA--TTCAATTTTATGATTGT 20090 Query 42795 CTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGT 42854 ||||||||||| || ||||| |||||||| || || || ||| | ||||| || || || Sbjct 20091 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 20150 Query 42855 ATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCG 42914 | | || || || | || |||||||||||| | || | ||| | | | | Sbjct 20151 A-TCGGCGGCTCCCT-ATCAGTGCTATGCATGGTTCCTTGGTAATTTCTAGTTTGATCAG 20208 Query 42915 TGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGAC 42974 ||||| | ||||| ||| ||| | || |||| || ||||||||||| || || Sbjct 20209 GGAAACCAAAGAAAATGAATCTGCTAATGAAGGTTACAGATTAGGTCAAGAGGAAGAAAC 20268 Query 42975 T 42975 | Sbjct 20269 T 20269 >seq32305 Length=14517 Score = 140 bits (154), Expect = 9e-29 Identities = 181/245 (74%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 42334 TGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCG 42391 ||||||||||| ||||||| |||| || | | | || || | ||| |||||| | Sbjct 12732 TGGTTTGGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTT 12675 Query 42392 CTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTC 42451 | ||||||| ||| |||| ||||| |||||||| |||||||||||||| ||||| |||| Sbjct 12674 CCTTCATTGTTGCTTCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTC 12615 Query 42452 TTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGAC 42511 | || || || ||||| || ||||| |||||| | | |||| | || ||||| Sbjct 12614 TACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTT 12555 Query 42512 TACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGAC 42571 | || || ||| | ||||||||||| | || |||| |||||| | ||||| | ||| | Sbjct 12554 TGCACTTTTATCCAATCTGGGAAGCAACATCCGTTGATGAATGGTTATACAACGACGGTC 12495 Query 42572 CTTAT 42576 ||||| Sbjct 12494 CTTAT 12490 >seq1151 Length=20901 Score = 132 bits (146), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || || | || |||||||| |||| |||||| Sbjct 11221 TGGGGTCGCTTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACTTTGGATGGTTT 11280 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| | ||||| ||||| || | | | | |||| |||||| | || ||||| Sbjct 11281 GGTGTTTTTATGAT-CCCTGCCTTATTGACCGAAACTTCTGTATTTATTATTGCCTTCAT 11339 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| ||||| |||||||| |||| ||||||||| ||||| ||||| || || Sbjct 11340 TGCTGCTCCTCCAGTAGATATTGATGGTATTCATGAACCTGTTTCTGGATCTCTACTTTA 11399 Query 42459 TGGCAACAACATCATCTCTGGTGCC 42483 || ||||| || ||||| |||||| Sbjct 11400 CGGAAACAATATTATCTCAGGTGCC 11424 >seq28567 Length=163623 Score = 122 bits (134), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 43075 CCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAAT 43134 || || ||||| |||||||| ||| || | || | || |||||||| || ||| | ||| Sbjct 84167 CCTGTAGTGGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 84108 Query 43135 GGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCT 43194 ||||| || || ||||||||| | ||||||| || ||| || | |||||| | Sbjct 84107 GGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGTGTGTAATTAATTCTTGGGAT 84048 Query 43195 GATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAAC 43254 ||||||| || |||| |||| |||| | || || ||||| || || ||||| |||||| Sbjct 84047 GATATTT--AACTGTGCTAACCATGGCATGGAAGTTATGCATGAACGAAATGCTCATAAC 83990 Query 43255 TTCCCGCTTGATCT 43268 ||||| || ||||| Sbjct 83989 TTCCCTCTAGATCT 83976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142848033000096